RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CASP9P55211 416 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 CHRNEQ04844 493 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 CBFBQ13951 182 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 SYPL1Q16563 259 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 PLXDC2Q6UX71 529 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 EIF3MQ7L2H7 374 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 CHMP1BQ7LBR1 199 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 C16orf62Q7Z3J2 963 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 KIF18BQ86Y91 864 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 MSRB3Q8IXL7 192 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 GOLGA6L1Q8N7Z2 621 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 ANKFN1Q8N957 763 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 OR10D3Q8NH80 312 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 FBXO27Q8NI29 283 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 FNDC9Q8TBE3 224 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 FAM222BQ8WU58 562 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 FIG4Q92562 907 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 VPS33AQ96AX1 596 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 INTS12Q96CB8 462 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 LRRC46Q96FV0 321 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 SH3YL1Q96HL8 342 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 ZNF845Q96IR2 970 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 MARK4Q96L34 752 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 LURAP1Q96LR2 239 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 RNF145Q96MT1 663 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 PINK1Q9BXM7 581 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 CCDC134Q9H6E4 229 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 TPT1P8Q9HAU6 139 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 BCL2L10Q9HD36 194 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 PCDHB14Q9Y5E9 798 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 RAI1Q7Z5J4 1906 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 AKAP6Q13023 2319 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 MYO9AB2RTY4 2548 aa7.34□□□□□ -1.23
HDGFL3-205ENST00000568129 HRNRQ86YZ3 2850 aaPredicted RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 A0A096LPI6 279 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 A0A1W2PP18 115 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CLIC1O00299 241 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 ATP8B1O43520 1251 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 ADAM11O75078 769 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SS18L1O75177 396 aaPredicted RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CTAG2O75638 210 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CSTAP01040 98 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 GSNP06396 782 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SNRPB2P08579 225 aaKnown RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 EPXP11678 715 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 FCGR2AP12318 317 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CD1EP15812 388 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 GPX2P18283 190 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SHC1P29353 583 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC6A8P48029 635 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CLK1P49759 484 aaKnown RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 MAP2K6P52564 334 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SESN3P58005 492 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 KRTAP10-9P60411 292 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 RAC3P60763 192 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 TLE4Q04727 773 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 FOXF1Q12946 379 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 FADDQ13158 208 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SELENBP1Q13228 472 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SQLEQ14534 574 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 PON3Q15166 354 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 QPRTQ15274 297 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 RGNQ15493 299 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 ZSWIM7Q19AV6 140 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 NDUFAF6Q330K2 333 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 PAGE3Q5JUK9 113 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 DLEU7Q6UYE1 221 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 FAM214BQ7L5A3 538 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 OLIG3Q7RTU3 272 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 BTLAQ7Z6A9 289 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 UBQLNLQ8IYU4 475 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 LILRA2Q8N149 483 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 DPP10Q8N608 796 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 OR2V1Q8NHB1 315 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC38A5Q8WUX1 472 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 DYDC1Q8WWB3 177 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM234Q8WY98 164 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 OSTF1Q92882 214 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC35B4Q969S0 331 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SPDL1Q96EA4 605 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CHMP6Q96FZ7 201 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 GMPPAQ96IJ6 420 aaPredicted RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 KLHL15Q96M94 604 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 THUMPD3Q9BV44 507 aaKnown RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CCDC106Q9BWC9 280 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 RSPO3Q9BXY4 272 aaPredicted RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 ADAM19Q9H013 955 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 RABEP2Q9H5N1 569 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 COQ10BQ9H8M1 238 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 DNAJB12Q9NXW2 375 aaKnown RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 ELOVL5Q9NYP7 299 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC25A37Q9NYZ2 338 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CALML5Q9NZT1 146 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 SLAMF8Q9P0V8 285 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 PACSIN3Q9UKS6 424 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 CHST2Q9Y4C5 530 aa7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 ANKRD17O75179 2603 aaKnown RBP7.33□□□□□ -1.24
HDGFL3-205ENST00000568129 MED13LQ71F56 2210 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 DSCAMO60469 2012 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms