RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 OR8D2Q9GZM6 311 aa13.45□□□□□ -0.26
COMMD4-221ENST00000567935 UBQLN4Q9NRR5 601 aa13.45□□□□□ -0.26
COMMD4-221ENST00000567935 CLN6Q9NWW5 311 aa13.45□□□□□ -0.26
COMMD4-221ENST00000567935 NXT1Q9UKK6 140 aaKnown RBP13.45□□□□□ -0.26
COMMD4-221ENST00000567935 COMMD3-BMI1R4GMX3 469 aa13.45□□□□□ -0.26
COMMD4-221ENST00000567935 C2orf92A0A1B0GVN3 265 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 OR2W5A6NFC9 320 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CCDC160A6NGH7 325 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 SERINC4A6NH21 518 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 VSTM2BA6NLU5 285 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CLDN24A6NM45 220 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CPNE3O75131 537 aaKnown RBP13.44□□□□□ -0.26
COMMD4-221ENST00000567935 OMPP47874 163 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 SMSP52788 366 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CNPY1Q3B7I2 92 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 SLC25A30Q5SVS4 291 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 MEDAGQ5VYS4 303 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-221ENST00000567935 PWWP2BQ6NUJ5 590 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 RPL13AP3Q6NVV1 102 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CDK20Q8IZL9 346 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 SLC43A2Q8N370 569 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF540Q8NDQ6 660 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 OR4N2Q8NGD1 307 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 APH1BQ8WW43 257 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 METTL21AQ8WXB1 218 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 OSTF1Q92882 214 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 ADIPOR1Q96A54 375 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 EXOSC3Q9NQT5 275 aaKnown RBP13.44□□□□□ -0.26
COMMD4-221ENST00000567935 RASSF1Q9NS23 344 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 SLC22A11Q9NSA0 550 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 DNAJB12Q9NXW2 375 aaKnown RBP13.44□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF226Q9NYT6 803 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CNOT2Q9NZN8 540 aaKnown RBP13.44□□□□□ -0.26
COMMD4-221ENST00000567935 AKAP7Q9P0M2 348 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CTSFQ9UBX1 484 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 RSL24D1Q9UHA3 163 aaKnown RBP13.44□□□□□ -0.26
COMMD4-221ENST00000567935 PSORS1C1Q9UIG5 152 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 SLC7A7Q9UM01 511 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 CEPT1Q9Y6K0 416 aa13.44□□□□□ -0.26
COMMD4-221ENST00000567935 USP9YO00507 2555 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 NPIPA5A0A0B4J1W7 369 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 EFCAB10A6NFE3 127 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 CLCA1A8K7I4 914 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 PTGES3LE9PB15 166 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 NPIPA7E9PJI5 369 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 TMX2-CTNND1H3BSU7 103 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 KLF4O43474 513 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 CHP2O43745 196 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 XPNPEP2O43895 674 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 NOL3O60936 208 aaKnown RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 OR6B1O95007 311 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 HEXBP07686 556 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 NGFRP08138 427 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 NPIPA8P0DM63 369 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 HPGDP15428 266 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 POU1F1P28069 291 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 HTR2AP28223 471 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 CCKBRP32239 447 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 RFX3P48380 749 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 GIPRP48546 466 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 CDK5Q00535 292 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 MC2RQ01718 297 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 EBPQ15125 230 aaKnown RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 TMEM44Q2T9K0 475 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 KLHL26Q53HC5 615 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 CCDC81Q6ZN84 652 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 Q6ZPB1 254 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 NKAIN4Q8IVV8 208 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF614Q8N883 585 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 ZSCAN1Q8NBB4 408 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 CNOT9Q92600 299 aaKnown RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 TP53INP1Q96A56 240 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 TSC22D3Q99576 134 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 NUDT9Q9BW91 350 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 POLDIP3Q9BY77 421 aaKnown RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 WDR54Q9H977 334 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 FBXO8Q9NRD0 319 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 CTPS2Q9NRF8 586 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 FKBP14Q9NWM8 211 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 PTTG2Q9NZH5 202 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 SELENONQ9NZV5 590 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 C19orf25Q9UFG5 118 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 PPIEQ9UNP9 301 aaKnown RBP13.43□□□□□ -0.26
COMMD4-221ENST00000567935 ABCA12Q86UK0 2595 aa13.43□□□□□ -0.26
COMMD4-221ENST00000567935 A0A0B4J2E0 115 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 A0A1B0GX12 115 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 SNTNA6NMZ2 147 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 A8MUA0 341 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 B4E171 279 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 SCDO00767 359 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 ALOX12BO75342 701 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 SEC14L2O76054 403 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 LYPD3O95274 346 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 CSTAP01040 98 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 THY1P04216 161 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 TP53P04637 393 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 HTR1AP08908 422 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms