RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ART1	P52961	327 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	IST1	P53990	364 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	CASP9	P55211	416 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	SUMO3	P55854	103 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	CTBP2	P56545	445 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	NME5	P56597	212 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	UFM1	P61960	85 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	GUSBP1	Q15486	140 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	TOMM34	Q15785	309 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	CTU2	Q2VPK5	515 aa	Known RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	TMEM176B	Q3YBM2	270 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	FAM174B	Q3ZCQ3	159 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	TTMP	Q5BVD1	217 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	SPANXN4	Q5MJ08	99 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	PDZK1	Q5T2W1	519 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	SAXO2	Q658L1	398 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	NXN	Q6DKJ4	435 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	HEPHL1	Q6MZM0	1159 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	PPP4R4	Q6NUP7	873 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZNF474	Q6S9Z5	364 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	CBLN3	Q6UW01	205 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ESPNL	Q6ZVH7	1005 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	FAM214B	Q7L5A3	538 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ATP6V1C2	Q8NEY4	427 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	TOR1AIP2	Q8NFQ8	470 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	OR5W2	Q8NH69	310 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	OR2V1	Q8NHB1	315 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	RFWD2	Q8NHY2	731 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	FBXO27	Q8NI29	283 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	NINJ1	Q92982	152 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ARSG	Q96EG1	525 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	NEURL3	Q96EH8	262 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	REXO5	Q96IC2	774 aa	Known RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	GMPPA	Q96IJ6	420 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ADGRG7	Q96K78	797 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	TEX37	Q96LM6	180 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	CCDC115	Q96NT0	180 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	WFIKKN1	Q96NZ8	548 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	OR52E6	Q96RD3	313 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZBTB18	Q99592	522 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLC35A5	Q9BS91	424 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	LAT2	Q9GZY6	243 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	OPN3	Q9H1Y3	402 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	LIME1	Q9H400	295 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	SERHL2	Q9H4I8	314 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	CXorf56	Q9H5V9	222 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	WDR55	Q9H6Y2	383 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	POLE3	Q9NRF9	147 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	AIG1	Q9NVV5	245 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	BTNL2	Q9UIR0	455 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ST6GALNAC2	Q9UJ37	374 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	ADAM21	Q9UKJ8	722 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	MKLN1	Q9UL63	735 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	PROCR	Q9UNN8	238 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	EMC9	Q9Y3B6	208 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	RRP15	Q9Y3B9	282 aa	Known RBP	6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	GPR45	Q9Y5Y3	372 aa		6.2	□□□□□ -1.42
SF3B3-209	ENST00000567635	USF3	Q68DE3	2245 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	CELSR1	Q9NYQ6	3014 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	PLCE1	Q9P212	2302 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	DNAJA2	O60884	412 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLC22A3	O75751	556 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	CYP7B1	O75881	506 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	CSTA	P01040	98 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	IL6	P05231	212 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	PGR	P06401	933 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	ALDOC	P09972	364 aa	Known RBP	6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	PABPC4L	P0CB38	370 aa	Known RBP	6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	POU2F1	P14859	743 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	IDO1	P14902	403 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	PRKCA	P17252	672 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	ELK4	P28324	431 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	IL12A	P29459	219 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	SFTPD	P35247	375 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	UGT2B10	P36537	528 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	KCNJ5	P48544	419 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	KHK	P50053	298 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	ANXA11	P50995	505 aa	Known RBP	6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	PRSS12	P56730	875 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	LRRC74A	Q0VAA2	488 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	FOXF1	Q12946	379 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	CBFB	Q13951	182 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	NDUFAF6	Q330K2	333 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLC25A53	Q5H9E4	307 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZNF621	Q6ZSS3	439 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	EIF3M	Q7L2H7	374 aa	Known RBP	6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	RNF130	Q86XS8	419 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	TMCO5A	Q8N6Q1	288 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	TRIML2	Q8N7C3	387 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	GLB1L3	Q8NCI6	653 aa	Predicted RBP	6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	OIT3	Q8WWZ8	545 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	ROBO4	Q8WZ75	1007 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZNF75CP	Q92670	426 aa	Predicted RBP	6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	RAB8B	Q92930	207 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	ROPN1L	Q96C74	230 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	MRGPRX4	Q96LA9	322 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	KLHL15	Q96M94	604 aa		6.19	□□□□□ -1.42
SF3B3-209	ENST00000567635	FOXC2	Q99958	501 aa		6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms