RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CACYBPQ9HB71 228 aaKnown RBP14.17□□□□□ -0.14
USB1-208ENST00000563207 NDE1Q9NXR1 346 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 FLRT3Q9NZU0 649 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 PRDM4Q9UKN5 801 aa14.17□□□□□ -0.14
USB1-208ENST00000563207 DSPPQ9NZW4 1301 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 AGAP5A6NIR3 686 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 DBIP07108 87 aaKnown RBP14.16□□□□□ -0.14
USB1-208ENST00000563207 ETS2P15036 469 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 TCEA1P23193 301 aaKnown RBP14.16□□□□□ -0.14
USB1-208ENST00000563207 DNAJA1P31689 397 aaKnown RBP14.16□□□□□ -0.14
USB1-208ENST00000563207 CDK6Q00534 326 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 GANABQ14697 944 aaKnown RBP14.16□□□□□ -0.14
USB1-208ENST00000563207 MAPK11Q15759 364 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 ADRM1Q16186 407 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 CYP51A1Q16850 503 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 SLC25A35Q3KQZ1 300 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 PDZK1Q5T2W1 519 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 C8orf82Q6P1X6 216 aaPredicted RBP14.16□□□□□ -0.14
USB1-208ENST00000563207 CMIPQ8IY22 773 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 PEX5LQ8IYB4 626 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 FADS6Q8N9I5 356 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 OR4K17Q8NGC6 315 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 OR10A6Q8NH74 314 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 PHOSPHO1Q8TCT1 267 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 TRIB1Q96RU8 372 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 SLC39A3Q9BRY0 314 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 PRDM14Q9GZV8 571 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.16□□□□□ -0.14
USB1-208ENST00000563207 CRIM1Q9NZV1 1036 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 ZNF232Q9UNY5 417 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 SLC35A3Q9Y2D2 325 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 IFT52Q9Y366 437 aa14.16□□□□□ -0.14
USB1-208ENST00000563207 MAP1AP78559 2803 aaPredicted RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 SERINC4A6NH21 518 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 AHRRA9YTQ3 701 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 GTPBP1O00178 669 aaKnown RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 EIF4E2O60573 245 aaKnown RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 CTAG2O75638 210 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 PGM3O95394 542 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 NUDT7P0C024 238 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 IL7RP16871 459 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 RPS4Y1P22090 263 aaKnown RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 SRD5A2P31213 254 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 STARP49675 285 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 DSCR4P56555 118 aaPredicted RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 SCARB2Q14108 478 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 SELPLGQ14242 412 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 FGFBP1Q14512 234 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 INTS11Q5TA45 600 aaKnown RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 OR5M10Q6IEU7 315 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 ERICH5Q6P6B1 374 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 SPNS3Q6ZMD2 512 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 EIF3MQ7L2H7 374 aaKnown RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 TRPM8Q7Z2W7 1104 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 CALHM3Q86XJ0 350 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 KRT73Q86Y46 540 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 C9orf106Q8NAJ2 232 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 HIPK4Q8NE63 616 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 BHLHE22Q8NFJ8 381 aaPredicted RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 TOR1AIP2Q8NFQ8 470 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 ABTB1Q969K4 478 aaPredicted RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 MAL2Q969L2 176 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 REXO5Q96IC2 774 aaKnown RBP14.15□□□□□ -0.14
USB1-208ENST00000563207 NSL1Q96IY1 281 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 ZNF607Q96SK3 696 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 SPATA5L1Q9BVQ7 753 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 ARMC7Q9H6L4 198 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 ARL8BQ9NVJ2 186 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 KCNE5Q9UJ90 142 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 FBXL2Q9UKC9 423 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 ANGPT4Q9Y264 503 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 SPG11Q96JI7 2443 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 DOCK7Q96N67 2140 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 PCNX3Q9H6A9 2034 aa14.15□□□□□ -0.14
USB1-208ENST00000563207 NPIPA5A0A0B4J1W7 369 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 HSPB2A8KAH6 182 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 NPIPA7E9PJI5 369 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 SYT5O00445 386 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 ZNF264O43296 627 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 DNAJA2O60884 412 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 THBS1P07996 1170 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 NPIPA8P0DM63 369 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 NID1P14543 1247 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 CALB2P22676 271 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 KIR2DL3P43628 341 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 ART1P52961 327 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 IST1P53990 364 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 SUMO3P55854 103 aaPredicted RBP14.14□□□□□ -0.15
USB1-208ENST00000563207 KCNJ10P78508 379 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 FOXF2Q12947 444 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 VEZF1Q14119 521 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 LARS2Q15031 903 aaKnown RBP14.14□□□□□ -0.15
USB1-208ENST00000563207 HSPB2Q16082 182 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 GLYR1Q49A26 553 aaPredicted RBP14.14□□□□□ -0.15
USB1-208ENST00000563207 RABL3Q5HYI8 236 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 NHSL2Q5HYW2 709 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 NSUN5P2Q63ZY6 315 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 PTOV1Q86YD1 416 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 C10orf111Q8N326 155 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 ZNF614Q8N883 585 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms