RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 TATDN3Q17R31 274 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 C16orf62Q7Z3J2 963 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 CLDN19Q8N6F1 224 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 C14orf178Q8N769 122 aaPredicted RBP3.92□□□□□ -1.78
LINC00557-201ENST00000563184 FGGYQ96C11 551 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 PLEKHF1Q96S99 279 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 RIT2Q99578 217 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 SCML2Q9UQR0 700 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 ZNF256Q9Y2P7 627 aaPredicted RBP3.92□□□□□ -1.78
LINC00557-201ENST00000563184 WDR45Q9Y484 360 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 ALG6Q9Y672 507 aa3.92□□□□□ -1.78
LINC00557-201ENST00000563184 IGHV2-70DA0A0C4DH43 119 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 A0A1W2PNV4 684 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 SULT2B1O00204 365 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 BTN3A3O00478 584 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 NMT1P30419 496 aaKnown RBP3.91□□□□□ -1.78
LINC00557-201ENST00000563184 AP3M2P53677 418 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 MXD4Q14582 209 aaPredicted RBP3.91□□□□□ -1.78
LINC00557-201ENST00000563184 SPATA46Q5T0L3 261 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 ATF7IP2Q5U623 682 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 LIPNQ5VXI9 398 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 GALNT17Q6IS24 598 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 HSD17B13Q7Z5P4 300 aaPredicted RBP3.91□□□□□ -1.78
LINC00557-201ENST00000563184 ACOT1Q86TX2 421 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 PPP1R27Q86WC6 154 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 KIR3DL3Q8N743 410 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 LINC01006Q8NI28 216 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 PAQR8Q8TEZ7 354 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 C16orf74Q96GX8 76 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 AMDHD1Q96NU7 426 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 RMND5AQ9H871 391 aa3.91□□□□□ -1.78
LINC00557-201ENST00000563184 TNRQ92752 1358 aa3.9□□□□□ -1.78
LINC00557-201ENST00000563184 IGHV7-81A0A0B4J1V7 117 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 K7N7A8 449 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 TBL1XO60907 577 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 TIMP1P01033 207 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 H2BFMP0C1H6 154 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 AQP1P29972 269 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 EPHX2P34913 555 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 SLC26A2P50443 739 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 ELAVL3Q14576 367 aaKnown RBP3.9□□□□□ -1.79
LINC00557-201ENST00000563184 KYAT1Q16773 422 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 SCARA5Q6ZMJ2 495 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 GMCL1P1Q8NEA9 526 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 OR2T3Q8NH03 318 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 SLC5A11Q8WWX8 675 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 PELI1Q96FA3 418 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 MS4A14Q96JA4 679 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 MAGEB18Q96M61 343 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 OMDQ99983 421 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 ERP44Q9BS26 406 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 SRXN1Q9BYN0 137 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 RHBGQ9H310 441 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 ISG20L2Q9H9L3 353 aaKnown RBP3.9□□□□□ -1.79
LINC00557-201ENST00000563184 AIPL1Q9NZN9 384 aa3.9□□□□□ -1.79
LINC00557-201ENST00000563184 UBQLN1Q9UMX0 589 aaKnown RBP3.9□□□□□ -1.79
LINC00557-201ENST00000563184 FAM231BA6NCW3 169 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 ADCY5O95622 1261 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 IGHV3-48P01763 117 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 RPA2P15927 270 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 CALB2P22676 271 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 PSMA5P28066 241 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 CHI3L1P36222 383 aaPredicted RBP3.89□□□□□ -1.79
LINC00557-201ENST00000563184 PPT1P50897 306 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 HSPA2P54652 639 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 TGIF2LYQ8IUE0 185 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 SLC38A6Q8IZM9 456 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 ZNF540Q8NDQ6 660 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 STXBP6Q8NFX7 210 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 OR10A7Q8NGE5 316 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 CTNNBL1Q8WYA6 563 aaPredicted RBP3.89□□□□□ -1.79
LINC00557-201ENST00000563184 FRAT1Q92837 279 aaPredicted RBP3.89□□□□□ -1.79
LINC00557-201ENST00000563184 NEIL2Q969S2 332 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 PHYHIPLQ96FC7 376 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 B3GALT6Q96L58 329 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 TXN2Q99757 166 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 CNPY3Q9BT09 278 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 PTGES2Q9H7Z7 377 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 WARS2Q9UGM6 360 aaKnown RBP3.89□□□□□ -1.79
LINC00557-201ENST00000563184 RASD1Q9Y272 281 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 MAD1L1Q9Y6D9 718 aa3.89□□□□□ -1.79
LINC00557-201ENST00000563184 VSTM2BA6NLU5 285 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 NPIPA7E9PJI5 369 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 PRKYO43930 277 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 UGT2B4P06133 528 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 NPIPA8P0DM63 369 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 HNF1AP20823 631 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 OTX2P32243 289 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 P2RY1P47900 373 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 PRKXP51817 358 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 CBX1P83916 185 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 ZNF45Q02386 682 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 TAF7Q15545 349 aaPredicted RBP3.88□□□□□ -1.79
LINC00557-201ENST00000563184 TPD52L1Q16890 204 aaPredicted RBP3.88□□□□□ -1.79
LINC00557-201ENST00000563184 TTC23Q5W5X9 447 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 DNM1P46Q6ZS02 220 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 ZNF589Q86UQ0 364 aaPredicted RBP3.88□□□□□ -1.79
LINC00557-201ENST00000563184 LCA5Q86VQ0 697 aa3.88□□□□□ -1.79
LINC00557-201ENST00000563184 TPRA1Q86W33 373 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms