RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SP1P08047 785 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 HBQ1P09105 142 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 OR56A5P0C7T3 313 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ANPEPP15144 967 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 LBPP18428 481 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 GNAZP19086 355 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ATP6V1C1P21283 382 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ME2P23368 584 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 PIK3R1P27986 724 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 CPOXP36551 454 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MMP12P39900 470 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MTNR1AP48039 350 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 HSPA13P48723 471 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 NUDT2P50583 147 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MTTPP55157 894 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SH3BGRP55822 239 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 AP1S2P56377 157 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 RPP30P78346 268 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 CDKL1Q00532 357 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 PLOD1Q02809 727 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 CUL3Q13618 768 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 KLF9Q13886 244 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 FASTKQ14296 549 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 RCN1Q15293 331 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 RBMS2Q15434 407 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 TAF11Q15544 211 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 GPR68Q15743 365 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ETFDHQ16134 617 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 RBBP7Q16576 425 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SLC25A35Q3KQZ1 300 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 UNC50Q53HI1 259 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ZNF789Q5FWF6 425 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ENTPD8Q5MY95 495 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SAMD4BQ5PRF9 694 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 VAX1Q5SQQ9 334 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 GPRC6AQ5T6X5 926 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SPINK14Q6IE38 97 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SULT1C3Q6IMI6 304 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ZNF549Q6P9A3 640 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 NEK10Q6ZWH5 1172 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 FRA10AC1Q70Z53 315 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 GALNTL5Q7Z4T8 443 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ARPINQ7Z6K5 226 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 KMT5CQ86Y97 462 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 CAMK1DQ8IU85 385 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 DDIASQ8IXT1 998 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 DEFB107AQ8IZN7 70 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 DPP10Q8N608 796 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ACVR1CQ8NER5 493 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 TNIP2Q8NFZ5 429 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 OR11G2Q8NGC1 345 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MCOLN3Q8TDD5 553 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SLC26A7Q8TE54 656 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 PIH1D2Q8WWB5 315 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ASZ1Q8WWH4 475 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ATL1Q8WXF7 558 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 CNOT9Q92600 299 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 RNASE6Q93091 150 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 C8orf44Q96CB5 159 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ECHDC3Q96DC8 303 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 PHF21BQ96EK2 531 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 DCUN1D1Q96GG9 259 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 METTL2AQ96IZ6 378 aaKnown RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 PPP3R2Q96LZ3 170 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 BIRC8Q96P09 236 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 BTBD9Q96Q07 612 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 OR52B2Q96RD2 323 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MCCC1Q96RQ3 725 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 ATOH8Q96SQ7 321 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ZNF382Q96SR6 550 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ZBTB18Q99592 522 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 NDNQ99608 321 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 COPS8Q99627 209 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 ZNF184Q99676 751 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 GPR21Q99679 349 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 EBF4Q9BQW3 602 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 TTYH2Q9BSA4 534 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 RAB33BQ9H082 229 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 P2RY12Q9H244 342 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 OSGEPL1Q9H4B0 414 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 WDR55Q9H6Y2 383 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 ASB8Q9H765 288 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 WDR41Q9HAD4 459 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 S100A14Q9HCY8 104 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MID1IP1Q9NPA3 183 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SPAG4Q9NPE6 437 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 IL26Q9NPH9 171 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SDR39U1Q9NRG7 319 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 SMOXQ9NWM0 555 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 NMRK1Q9NWW6 199 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 HRASLS2Q9NWW9 162 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 NUDT4Q9NZJ9 180 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 PKD2L2Q9NZM6 624 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 IL1RAPL1Q9NZN1 696 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 CD274Q9NZQ7 290 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MSRB1Q9NZV6 116 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 MARCH4Q9P2E8 410 aaPredicted RBP2.91□□□□□ -1.94
SPG11-225ENST00000561391 LHX3Q9UBR4 397 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 SLC7A8Q9UHI5 535 aa2.91□□□□□ -1.94
SPG11-225ENST00000561391 CD84Q9UIB8 345 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms