RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 HDAC3O15379 428 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 KIAA0513O60268 411 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 UGT2B17O75795 530 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 CYP7B1O75881 506 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 RAF1P04049 648 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 IL12AP29459 219 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 QPRTQ15274 297 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 ZNF141Q15928 474 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 BEND6Q5SZJ8 279 aaPredicted RBP15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 PDSS1Q5T2R2 415 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 ATAD3BQ5T9A4 648 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 HEPHL1Q6MZM0 1159 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 HMGN2P46Q86SG4 172 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 VPS37AQ8NEZ2 397 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 TOR1AIP2Q8NFQ8 470 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 OR5W2Q8NH69 310 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 ABHD3Q8WU67 409 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 XAGE5Q8WWM1 108 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 ROBO4Q8WZ75 1007 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 OSTF1Q92882 214 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 TLCD1Q96CP7 247 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 NEURL3Q96EH8 262 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 ZC3HAV1LQ96H79 300 aaKnown RBP15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 MARK4Q96L34 752 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 SLC39A3Q9BRY0 314 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 CXXC4Q9H2H0 198 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 C12orf49Q9H741 205 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 TMBIM4Q9HC24 238 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 ELOVL5Q9NYP7 299 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 NKIRAS1Q9NYS0 192 aa15.38■□□□□ 0.05
CDC42BPB-208ENST00000561271 TRPC5OSA6NMA1 111 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 DEFB108AA8MXU0 73 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 ZNF195O14628 629 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 EIF4E2O60573 245 aaKnown RBP15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 ATE1O95260 518 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 NTN1O95631 604 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 CSTAP01040 98 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 UBTFL6P0CB48 400 aaPredicted RBP15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 ADH6P28332 368 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 AGTR1P30556 359 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 CDKN2CP42773 168 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 PCYT1AP49585 367 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 SELENBP1Q13228 472 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 CBFBQ13951 182 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 MAPK14Q16539 360 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 ANKRD34AQ69YU3 496 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 TYW3Q6IPR3 259 aaKnown RBP15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 RNF128Q8TEB7 428 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 ZFP90Q8TF47 636 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 ROPN1LQ96C74 230 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 MRGPRX4Q96LA9 322 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 CCDC115Q96NT0 180 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 INPP5KQ9BT40 448 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 KLHL4Q9C0H6 718 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 WDR45Q9Y484 360 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 GPR45Q9Y5Y3 372 aa15.37■□□□□ 0.05
CDC42BPB-208ENST00000561271 GJE1A6NN92 205 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 C16orf97H3BN30 126 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 BCAS1O75363 584 aaPredicted RBP15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 PGRP06401 933 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 NID1P14543 1247 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 SLC18A1P54219 525 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 CARD18P57730 90 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 KEAP1Q14145 624 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 TMEM176BQ3YBM2 270 aaPredicted RBP15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 ATG16L1Q676U5 607 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 NXNQ6DKJ4 435 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 DNAJC14Q6Y2X3 702 aaPredicted RBP15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 FRRS1Q6ZNA5 592 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 C22orf34Q6ZV56 151 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 MAVSQ7Z434 540 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 SPATA19Q7Z5L4 167 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 RNF130Q86XS8 419 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 CPNE4Q96A23 557 aaPredicted RBP15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 OR52E6Q96RD3 313 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 PANX1Q96RD7 426 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 THUMPD3Q9BV44 507 aaKnown RBP15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 LAT2Q9GZY6 243 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 QRSL1Q9H0R6 528 aaKnown RBP15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 MANSC1Q9H8J5 431 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 ZNF226Q9NYT6 803 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 BTNL2Q9UIR0 455 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 EDARQ9UNE0 448 aa15.36■□□□□ 0.05
CDC42BPB-208ENST00000561271 PLCE1Q9P212 2302 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 IGHV3-15A0A0B4J1V0 119 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 A0A1W2PNR3 127 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 PRAMEF27A3QJZ7 478 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 CCDC154A6NI56 674 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 HMGN4O00479 90 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 H6PDO95479 791 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 AGR2O95994 175 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 GSNP06396 782 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 CRYGSP22914 178 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 SLC7A1P30825 629 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 HPCAP84074 193 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 TIGD2Q4W5G0 525 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 SLC9B1Q4ZJI4 515 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 GPAT3Q53EU6 434 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 SLC25A53Q5H9E4 307 aa15.35■□□□□ 0.05
CDC42BPB-208ENST00000561271 LSRQ86X29 649 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms