RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TSSK6Q9BXA6 273 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 CDCA4Q9BXL8 241 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 DPH1Q9BZG8 443 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 NRSN2Q9GZP1 204 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 C20orf141Q9NUB4 165 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 TBC1D23Q9NUY8 699 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 MED17Q9NVC6 651 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 C19orf25Q9UFG5 118 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 IGHV3-20A0A0C4DH32 117 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 ALG1L2C9J202 215 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 ZNF264O43296 627 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 ICOSLGO75144 302 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 RFPL3O75679 317 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 FADS2O95864 444 aaKnown RBP11.84□□□□□ -0.51
SNX1-211ENST00000560829 ENDOUP21128 410 aaKnown RBP11.84□□□□□ -0.51
SNX1-211ENST00000560829 ABCD3P28288 659 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 C21orf33P30042 268 aaPredicted RBP11.84□□□□□ -0.51
SNX1-211ENST00000560829 COPZ1P61923 177 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 ST3GAL4Q11206 333 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 SNAPC1Q16533 368 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 PAPD4Q6PIY7 484 aaKnown RBP11.84□□□□□ -0.51
SNX1-211ENST00000560829 HSDL2Q6YN16 418 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 CPEB2Q7Z5Q1 589 aaKnown RBP11.84□□□□□ -0.51
SNX1-211ENST00000560829 PRR22Q8IZ63 422 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 STX19Q8N4C7 294 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 OR2T33Q8NG76 320 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 OR4Q3Q8NH05 313 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 C9orf43Q8TAL5 461 aaPredicted RBP11.84□□□□□ -0.51
SNX1-211ENST00000560829 TMEM163Q8TC26 289 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 ARSGQ96EG1 525 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 VMP1Q96GC9 406 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 SLC38A2Q96QD8 506 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 LPAR4Q99677 370 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 LAT2Q9GZY6 243 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 ATP13A2Q9NQ11 1180 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 ICAM5Q9UMF0 924 aa11.84□□□□□ -0.51
SNX1-211ENST00000560829 RPL36Q9Y3U8 105 aaKnown RBP11.84□□□□□ -0.51
SNX1-211ENST00000560829 A0A087WUJ7 227 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 CDC14CA4D256 554 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 HTR3EA5X5Y0 456 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 OR6C70A6NIJ9 312 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 H3BMQ9 156 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 TLX2O43763 284 aaPredicted RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 TRMUO75648 421 aaKnown RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 IGF2P01344 180 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 KLK3P07288 261 aaPredicted RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 STSP08842 583 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 ZNF806P0C7X5 589 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 PAX7P23759 505 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 FXYD6P3P58550 94 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 PGGHGQ32M88 737 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 SYT14P1Q58G82 188 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 ERI1Q8IV48 349 aaKnown RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 SLC43A2Q8N370 569 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 CADM2Q8N3J6 435 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 PHOSPHO1Q8TCT1 267 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 RAB2BQ8WUD1 216 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 C3orf49Q96BT1 292 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 LRR1Q96L50 414 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 COG8Q96MW5 612 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 CMKLR1Q99788 373 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 MESP1Q9BRJ9 268 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 TEX12Q9BXU0 123 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 SLC19A3Q9BZV2 496 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 OR52D1Q9H346 318 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 AKIRIN1Q9H9L7 192 aaPredicted RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 DNAJC27Q9NZQ0 273 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 SELENONQ9NZV5 590 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 SIGLEC7Q9Y286 467 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 LOC102723996A0A087X1L8 192 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 SURF4O15260 269 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 OIP5O43482 229 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 EIF4E2O60573 245 aaKnown RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 CBFA2T3O75081 653 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 PTP4A3O75365 173 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 RCBTB2O95199 551 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 PCSK6P29122 969 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 SLC6A8P48029 635 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 ZNF91Q05481 1191 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 LSAMPQ13449 338 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 NCF4Q15080 339 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 CLEC12AQ5QGZ9 265 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 RNLSQ5VYX0 342 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 PLAG1Q6DJT9 500 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 WBP2NLQ6ICG8 309 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 SLC30A6Q6NXT4 461 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 FAM198BQ6UWH4 519 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 CCDC81Q6ZN84 652 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 ANKRD13BQ86YJ7 626 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 ZNF582Q96NG8 517 aaPredicted RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 BCL7BQ9BQE9 202 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 NAA50Q9GZZ1 169 aaKnown RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 UBQLN3Q9H347 655 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 HHATLQ9HCP6 504 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 MRPS18AQ9NVS2 196 aaKnown RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 AKAP7Q9P0M2 348 aaPredicted RBP11.83□□□□□ -0.52
SNX1-211ENST00000560829 CARD8Q9Y2G2 431 aa11.83□□□□□ -0.52
SNX1-211ENST00000560829 FER1L5A0AVI2 2057 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms