RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 WARS2Q9UGM6 360 aaKnown RBP9.97□□□□□ -0.81
SNRPA1-211ENST00000560433 COL27A1Q8IZC6 1860 aaPredicted RBP9.97□□□□□ -0.81
SNRPA1-211ENST00000560433 CNTRLQ7Z7A1 2325 aa9.97□□□□□ -0.81
SNRPA1-211ENST00000560433 A0A1W2PNU3 283 aaPredicted RBP9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 TMEM200CA6NKL6 621 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 CLCA1A8K7I4 914 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 HCRTR2O43614 444 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 CBFA2T3O75081 653 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 SOX30O94993 753 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 NUDT14O95848 222 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 HBQ1P09105 142 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 ZNF806P0C7X5 589 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 UBL4AP11441 157 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 MST1P26927 711 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 ITPKBP27987 946 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 IFNGR2P38484 337 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 CXCR4P61073 352 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 CDK5Q00535 292 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 ZNF117Q03924 483 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 ST3GAL4Q11206 333 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 TRA2AQ13595 282 aaKnown RBP eCLIP9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 ZBED5Q49AG3 693 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 C12orf73Q69YU5 71 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 RAB11FIP2Q7L804 512 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 SUMF1Q8NBK3 374 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 FAR1Q8WVX9 515 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 LRR1Q96L50 414 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 GPN3Q9UHW5 284 aaPredicted RBP9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 ENOPH1Q9UHY7 261 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 PSORS1C1Q9UIG5 152 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 COMMD3-BMI1R4GMX3 469 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 SDK2Q58EX2 2172 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 ALPK2Q86TB3 2170 aa9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 CNOT1A5YKK6 2376 aaKnown RBP9.96□□□□□ -0.81
SNRPA1-211ENST00000560433 FAM183AA6NL82 134 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 KLF4O43474 513 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 CHP2O43745 196 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 TSPAN2O60636 221 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 KLF7O75840 302 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 UMODP07911 640 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 FPR3P25089 353 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 PSMB9P28065 219 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 GP2P55259 537 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 COPZ1P61923 177 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 FNDC7Q5VTL7 733 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 AP1ARQ63HQ0 302 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 SLC27A4Q6P1M0 643 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 FAM198BQ6UWH4 519 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 CD300LDQ6UXZ3 194 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 RASSF6Q6ZTQ3 369 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 SHFQ7M4L6 423 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 ZBTB46Q86UZ6 589 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 IGFN1Q86VF2 1251 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 LINC00471Q8N535 108 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 ZNF441Q8N8Z8 693 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 ZNF527Q8NB42 609 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 PMM1Q92871 262 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 OR52D1Q9H346 318 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 ANKRD19PQ9H560 264 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 GALNT9Q9HCQ5 603 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 PARD6AQ9NPB6 346 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 TMEM9BQ9NQ34 198 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 FBXO8Q9NRD0 319 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 WDR70Q9NW82 654 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 CLN6Q9NWW5 311 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 RSL24D1Q9UHA3 163 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 MED31Q9Y3C7 131 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 MED12Q93074 2177 aa9.96□□□□□ -0.82
SNRPA1-211ENST00000560433 COL5A1P20908 1838 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 ENO4A6NNW6 628 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 ZNF264O43296 627 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 NDUFB5O43674 189 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 STK17BO94768 372 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 GSTM3P21266 225 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 TCEA1P23193 301 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 PCYT1AP49585 367 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 PSMD4P55036 377 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 LSM3P62310 102 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 SKP2Q13309 424 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 DOC2BQ14184 412 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 BTBD16Q32M84 506 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 GTF2IRD2BQ6EKJ0 949 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 ZNF613Q6PF04 617 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 ZNF620Q6ZNG0 422 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 ZNF550Q7Z398 422 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 TIPARPQ7Z3E1 657 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 GTF2IRD2Q86UP8 949 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 STX19Q8N4C7 294 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 OR13F1Q8NGS4 319 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 ZNF563Q8TA94 476 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 NR4A3Q92570 626 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 C3orf49Q96BT1 292 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 ISOC1Q96CN7 298 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 DCUN1D5Q9BTE7 237 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 TBL1XR1Q9BZK7 514 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 PCDHGB2Q9Y5G2 931 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 NPFFR2Q9Y5X5 522 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 UNC119BA6NIH7 251 aa9.95□□□□□ -0.82
SNRPA1-211ENST00000560433 CDC40O60508 579 aaKnown RBP eCLIP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms