RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CD247P20963 164 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 NUDT2P50583 147 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 SLC7A2P52569 658 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 ZNF136P52737 540 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 EPS8Q12929 822 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 ELOAQ14241 798 aaKnown RBP10.31□□□□□ -0.76
SNX1-204ENST00000559061 CYP51A1Q16850 503 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 VMACQ2NL98 169 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 RAET1LQ5VY80 246 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 EIF3MQ7L2H7 374 aaKnown RBP10.31□□□□□ -0.76
SNX1-204ENST00000559061 TSPYL5Q86VY4 417 aaPredicted RBP10.31□□□□□ -0.76
SNX1-204ENST00000559061 GRAMD2AQ8IUY3 354 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 CMIPQ8IY22 773 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 FAM26EQ8N5C1 309 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 NAXEQ8NCW5 288 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 HIPK4Q8NE63 616 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 OR4D11Q8NGI4 311 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 ITLN2Q8WWU7 325 aaPredicted RBP10.31□□□□□ -0.76
SNX1-204ENST00000559061 PMM1Q92871 262 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 SARAFQ96BY9 339 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 EXO5Q9H790 373 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 PTGES2Q9H7Z7 377 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.31□□□□□ -0.76
SNX1-204ENST00000559061 CALML5Q9NZT1 146 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 SLC5A6Q9Y289 635 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 SLC35A3Q9Y2D2 325 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 BAHCC1Q9P281 2608 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 MPDZO75970 2070 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 DOPEY2Q9Y3R5 2298 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 E9PLN8 166 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 H3BNH8 94 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 CCL21O00585 134 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 PRRG2O14669 202 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 ZG16O60844 167 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 CYP7B1O75881 506 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 OPN1LWP04000 364 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 GLI4P10075 376 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 KLK2P20151 261 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 ACVR2AP27037 513 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 HTR2AP28223 471 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 CPOXP36551 454 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 NUP107P57740 925 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 SESN3P58005 492 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 HOXC5Q00444 222 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 RBPJQ06330 500 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 RBBP4Q09028 425 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 KRT72Q14CN4 511 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 NPTX1Q15818 432 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.76
SNX1-204ENST00000559061 LIN52Q52LA3 116 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 C1orf185Q5T7R7 199 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 GKAP1Q5VSY0 366 aaPredicted RBP10.3□□□□□ -0.76
SNX1-204ENST00000559061 ZNF585AQ6P3V2 769 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 POMZP3Q6PJE2 187 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 DHRS4L2Q6PKH6 230 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 RPTNQ6XPR3 784 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 CCDC80Q76M96 950 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 LACC1Q8IV20 430 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 PEX5LQ8IYB4 626 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 TMCO5AQ8N6Q1 288 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 METTL25Q8N6Q8 603 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 PCYOX1LQ8NBM8 494 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 C11orf65Q8NCR3 313 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 CCDC197Q8NCU1 140 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 PHF10Q8WUB8 498 aaKnown RBP10.3□□□□□ -0.76
SNX1-204ENST00000559061 ZBTB8AQ96BR9 441 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 REXO5Q96IC2 774 aaKnown RBP10.3□□□□□ -0.76
SNX1-204ENST00000559061 ZNF845Q96IR2 970 aaPredicted RBP10.3□□□□□ -0.76
SNX1-204ENST00000559061 LRRC37BQ96QE4 947 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 VKORC1Q9BQB6 163 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 TTYH2Q9BSA4 534 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 PRR14Q9BWN1 585 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 SPATA9Q9BWV2 254 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 TP63Q9H3D4 680 aaPredicted RBP10.3□□□□□ -0.76
SNX1-204ENST00000559061 TMEM185BQ9H7F4 350 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 COQ10BQ9H8M1 238 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 CLCF1Q9UBD9 225 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 PACSIN3Q9UKS6 424 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 ACAD8Q9UKU7 415 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 LRRK2Q5S007 2527 aa10.3□□□□□ -0.76
SNX1-204ENST00000559061 A0A0J9YW62 118 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 H3BML4 177 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 GTPBP1O00178 669 aaKnown RBP10.29□□□□□ -0.76
SNX1-204ENST00000559061 FAAHO00519 579 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 WDR1O75083 606 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 DCTN3O75935 186 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 IL7RP16871 459 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 PRKAR1BP31321 381 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 RYKP34925 604 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 GSK3BP49841 420 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 CCR4P51679 360 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 ZNF41P51814 821 aaPredicted RBP10.29□□□□□ -0.76
SNX1-204ENST00000559061 PSME3P61289 254 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 SLC25A3Q00325 362 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 SRYQ05066 204 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 LIPEQ05469 1076 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 CBFBQ13951 182 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 BCL2A1Q16548 175 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 DUSP7Q16829 419 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 ZNF311Q5JNZ3 666 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms