RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 HDHD5Q9BXW7 423 aa9.74□□□□□ -0.85
TPM1-210ENST00000558264 MROQ9BYG7 248 aa9.74□□□□□ -0.85
TPM1-210ENST00000558264 NXF2Q9GZY0 626 aaKnown RBP9.74□□□□□ -0.85
TPM1-210ENST00000558264 SMURF1Q9HCE7 757 aa9.74□□□□□ -0.85
TPM1-210ENST00000558264 FGF20Q9NP95 211 aaPredicted RBP9.74□□□□□ -0.85
TPM1-210ENST00000558264 KRCC1Q9NPI7 259 aaPredicted RBP9.74□□□□□ -0.85
TPM1-210ENST00000558264 A0A0B4J2E0 115 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 LINC00854A0A1B0GVQ3 168 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 A0A1B0GX12 115 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 TLCD2A6NGC4 264 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 SNTNA6NMZ2 147 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 C17orf105B2RV13 164 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 BHLHE40O14503 412 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 SERPINI2O75830 405 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 UPK1BO75841 260 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 OR2B3O76000 313 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CPEP16870 476 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CELP19835 753 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 SDC2P34741 201 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CCR4P51679 360 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 HNRNPKP61978 463 aaKnown RBP eCLIP9.73□□□□□ -0.85
TPM1-210ENST00000558264 FABP5Q01469 135 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 HNRNPA0Q13151 305 aaKnown RBP9.73□□□□□ -0.85
TPM1-210ENST00000558264 C14orf28Q4W4Y0 310 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 SHISA6Q6ZSJ9 500 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 KLBQ86Z14 1044 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 ZNF595Q8IYB9 648 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 BCORP1Q8N888 145 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 POC5Q8NA72 575 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 OR51L1Q8NGJ5 315 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 KLHDC3Q9BQ90 382 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 LMF2Q9BU23 707 aaKnown RBP9.73□□□□□ -0.85
TPM1-210ENST00000558264 OR8D2Q9GZM6 311 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 NRSN2Q9GZP1 204 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 Q9N2J8 555 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 TNFRSF10DQ9UBN6 386 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 SIGLEC7Q9Y286 467 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 WDFY4Q6ZS81 3184 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 A0A1B0GVT2 93 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 LILRA5A6NI73 299 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 C12orf71A8MTZ7 269 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 ZNF670-ZNF695F2Z2N8 137 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 LMO7DNF2Z398 122 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 PRAMEF2O60811 474 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 NCR1O76036 304 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 AK1P00568 194 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CSTAP01040 98 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 TGM1P22735 817 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 EFNA3P52797 238 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CFHR1Q03591 330 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 PRKCDQ05655 676 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 PLEKHG7Q6ZR37 379 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 OAFQ86UD1 273 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CDK20Q8IZL9 346 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CAMKK1Q8N5S9 505 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 OR6C4Q8NGE1 309 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 RFKQ969G6 155 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.73□□□□□ -0.85
TPM1-210ENST00000558264 FSCN3Q9NQT6 498 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 WDFY3Q8IZQ1 3526 aa9.73□□□□□ -0.85
TPM1-210ENST00000558264 CD8B2A6NJW9 211 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 IMPA2O14732 288 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 SSX4O60224 188 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 PIAS2O75928 621 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 MSL3P1P0C860 447 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 CD8BP10966 210 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 SPNP16150 400 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 POU3F3P20264 500 aaPredicted RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 ENDOUP21128 410 aaKnown RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 HTR1FP30939 366 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 TNFSF8P32971 234 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 NUDT1P36639 197 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 ARL4DP49703 201 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 RP1P56715 2156 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 FOXK2Q01167 660 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 CRMP1Q14194 572 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 VWA2Q5GFL6 755 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 NXNL2Q5VZ03 156 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 NIPAL3Q6P499 406 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 OR10H4Q8NGA5 316 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 BRIX1Q8TDN6 353 aaKnown RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 UFD1Q92890 307 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 HLA-CQ95604 372 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 GAL3ST4Q96RP7 486 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 ZNF559Q9BR84 538 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 FN3KQ9H479 309 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 CUTCQ9NTM9 273 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 EXOSC1Q9Y3B2 195 aaKnown RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 PEX16Q9Y5Y5 336 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 HEATR5AQ86XA9 2040 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 C2orf92A0A1B0GVN3 265 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 TMEM129A0AVI4 362 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 MAGEB4O15481 346 aaPredicted RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 OIP5O43482 229 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 CHP2O43745 196 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 HMGN1P05114 100 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 PAICSP22234 425 aaKnown RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 HCCSP53701 268 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 SPANXN2Q5MJ10 180 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms