RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 EFNA2O43921 213 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 CNOT4O95628 575 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 G6PDP11413 515 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 MATN1P21941 496 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 SOAT1P35610 550 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 CCR4P51679 360 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 C21orf58P58505 322 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 HBA1P69905 142 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 ITGADQ13349 1161 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 CAPRIN1Q14444 709 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 SLC25A53Q5H9E4 307 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 ATAD3BQ5T9A4 648 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 C16orf62Q7Z3J2 963 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 C6orf120Q7Z4R8 191 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 KIRREL3Q8IZU9 778 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 GABRG1Q8N1C3 465 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 ZFP90Q8TF47 636 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 KISS1RQ969F8 398 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 ARSGQ96EG1 525 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 TRMT61AQ96FX7 289 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 ZNF701Q9NV72 531 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 RNF115Q9Y4L5 304 aa12.12□□□□□ -0.47
SNRPA1-204ENST00000558020 NPIPA5A0A0B4J1W7 369 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 NPIPA7E9PJI5 369 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 CYP7B1O75881 506 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 CD3EP07766 207 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 MYZAPP0CAP1 466 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 NPIPA8P0DM63 369 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 ENPP1P22413 925 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 FKBP2P26885 142 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 SHC1P29353 583 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 ATP5J2P56134 94 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 RPS4XP62701 263 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 PPP2R2BQ00005 443 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 QPRTQ15274 297 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 GPR68Q15743 365 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 ARHGAP11BQ3KRB8 267 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 C3orf33Q6P1S2 294 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 EMBQ6PCB8 327 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 OR5AK3PQ8NH89 298 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 OIT3Q8WWZ8 545 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 ST8SIA1Q92185 356 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 AKAP1Q92667 903 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 MUCL1Q96DR8 90 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 SRXN1Q9BYN0 137 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 LAT2Q9GZY6 243 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 ASIC5Q9NY37 505 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 KCNE3Q9Y6H6 103 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 HEATR5AQ86XA9 2040 aa12.11□□□□□ -0.47
SNRPA1-204ENST00000558020 ROS1P08922 2347 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 RNASET2O00584 256 aaKnown RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 CLOCKO15516 846 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 OIP5O43482 229 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 NTN1O95631 604 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 ADAP00813 363 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 CSTAP01040 98 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 NID1P14543 1247 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 PGCP20142 388 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 CSNK2A1P68400 391 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 RASGEF1BQ0VAM2 473 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 TOMM34Q15785 309 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 ZNF141Q15928 474 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 ETFDHQ16134 617 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 TIGD2Q4W5G0 525 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 PDZK1Q5T2W1 519 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 ANXA8L1Q5VT79 327 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 Q6ZT83 130 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 CIARTQ8N365 385 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 OR8J2Q8NGG1 315 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 OR5D16Q8NGK9 328 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 OR5B2Q96R09 309 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 KLHDC3Q9BQ90 382 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 THUMPD3Q9BV44 507 aaKnown RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 DPY30Q9C005 99 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 POLE3Q9NRF9 147 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 LAMP3Q9UQV4 416 aa12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 NUP214P35658 2090 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-204ENST00000558020 RNF103-CHMP3A0A140T963 221 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 PRSS51A0A1B0GVH4 220 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 TRIM64A6NGJ6 449 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 TRIM64BA6NI03 449 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 ZNF724A8MTY0 619 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 ETV2O00321 342 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 ANKRD28O15084 1053 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 BIRC5O15392 142 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 PLAUP00749 431 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 GUSBP08236 651 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms