RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ARMC8Q8IUR7 673 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 SLC15A3Q8IY34 581 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 ZZZ3Q8IYH5 903 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 FAM26EQ8N5C1 309 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 MEIOBQ8N635 442 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 GATSQ8NAP1 163 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 CLEC18CQ8NCF0 446 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 OR2T12Q8NG77 320 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 SLC25A43Q8WUT9 341 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-234ENST00000557703 SH3YL1Q96HL8 342 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-234ENST00000557703 NSL1Q96IY1 281 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 ZFP3Q96NJ6 502 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 UGT2B28Q9BY64 529 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 SERINC1Q9NRX5 453 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 ACER3Q9NUN7 267 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
SHMT2-234ENST00000557703 SLC13A4Q9UKG4 626 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 SPIN1Q9Y657 262 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-234ENST00000557703 DOPEY1Q5JWR5 2465 aa12.39□□□□□ -0.43
SHMT2-234ENST00000557703 USP9XQ93008 2570 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-234ENST00000557703 GCN1Q92616 2671 aaKnown RBP12.39□□□□□ -0.43
SHMT2-234ENST00000557703 ELOVL7A1L3X0 281 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 OR2M5A3KFT3 312 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 CD8B2A6NJW9 211 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 B4DXG7 233 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 WISP2O76076 250 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 MFN2O95140 757 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 NTN1O95631 604 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF708P17019 499 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 PRKCAP17252 672 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 PSMA4P25789 261 aaKnown RBP12.38□□□□□ -0.43
SHMT2-234ENST00000557703 TIMP3P35625 211 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 SLC1A3P43003 542 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 LHX2P50458 406 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 RPS3AP61247 264 aaKnown RBP12.38□□□□□ -0.43
SHMT2-234ENST00000557703 PSME3P61289 254 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 ARSKQ6UWY0 536 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 B3GNT6Q6ZMB0 384 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 ESPNLQ6ZVH7 1005 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 CHMP1BQ7LBR1 199 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 TRPM8Q7Z2W7 1104 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 GRINAQ7Z429 371 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 CD163Q86VB7 1156 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 ULK2Q8IYT8 1036 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 PGAM4Q8N0Y7 254 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 TMCO5AQ8N6Q1 288 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 POP5Q969H6 163 aaKnown RBP12.38□□□□□ -0.43
SHMT2-234ENST00000557703 WDYHV1Q96HA8 205 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 SLC39A3Q9BRY0 314 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 QRSL1Q9H0R6 528 aaKnown RBP12.38□□□□□ -0.43
SHMT2-234ENST00000557703 C1orf21Q9H246 121 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 ALG2Q9H553 416 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 TIGARQ9NQ88 270 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 SPRR3Q9UBC9 169 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 BAG5Q9UL15 447 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 MEMO1Q9Y316 297 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 NCKAP5O14513 1909 aa12.38□□□□□ -0.43
SHMT2-234ENST00000557703 RELNP78509 3460 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 WIPF3A6NGB9 483 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 M0QX08 132 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 CCL21O00585 134 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 ADAMDEC1O15204 470 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 FMO6PO60774 539 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 EPPINO95925 133 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 GP1BBP13224 206 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 POU3F2P20265 443 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-234ENST00000557703 UQCRFS1P47985 274 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 SMSP52788 366 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 HSF1Q00613 529 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 EPS8Q12929 822 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 SELENBP1Q13228 472 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 SELPLGQ14242 412 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 QPRTQ15274 297 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 C3AR1Q16581 482 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 EMC4Q5J8M3 183 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 NSUN5P2Q63ZY6 315 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 XKRXQ6PP77 449 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF836Q6ZNA1 936 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 ADGRE4PQ86SQ3 457 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 LACC1Q8IV20 430 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 MICU2Q8IYU8 434 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 C10orf111Q8N326 155 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 LSMEM1Q8N8F7 131 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF563Q8TA94 476 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
SHMT2-234ENST00000557703 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 C12orf10Q9HB07 376 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 CMTM6Q9NX76 183 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 TMEM181Q9P2C4 612 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 VDAC3Q9Y277 283 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 RPH3AQ9Y2J0 694 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-234ENST00000557703 SLC6A5Q9Y345 797 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF337Q9Y3M9 751 aa12.37□□□□□ -0.43
SHMT2-234ENST00000557703 MED12Q93074 2177 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 CENPVL1A0A0U1RR11 272 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 LRRTM2O43300 516 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 GMNNO75496 209 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 CYP7B1O75881 506 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms