RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 GOT2P00505 430 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 KRT6AP02538 564 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 STAG3L1P0CL83 205 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CCL2P13500 99 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PRG2P13727 222 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CD36P16671 472 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 FUT1P19526 365 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SSTR1P30872 391 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 MAT2AP31153 395 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CAPZBP47756 277 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 KCNJ1P48048 391 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 GSSP48637 474 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SERPINB9P50453 376 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 HNRNPFP52597 415 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PRPS1P60891 318 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 AP1S1P61966 158 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RPS8P62241 208 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 MRPS25P82663 173 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CCZ1BP86790 482 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CCZ1P86791 482 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SEMG2Q02383 582 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SLAQ13239 276 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PPIL2Q13356 520 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CCL14Q16627 93 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CHRFAM7AQ494W8 412 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 GPAT3Q53EU6 434 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CELF3Q5SZQ8 465 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 LINC00523Q86TU6 105 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CDR2LQ86X02 465 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ZBED8Q8IZ13 594 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CLEC4FQ8N1N0 589 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CLEC1AQ8NC01 280 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NUP37Q8NFH4 326 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TSEN15Q8WW01 171 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NTNG2Q96CW9 530 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NXPE2Q96DL1 559 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 WBP1Q96G27 269 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 MAGED4Q96JG8 741 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 DNAJC1Q96KC8 554 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 FOXN4Q96NZ1 517 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PRAP1Q96NZ9 151 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TRNT1Q96Q11 434 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC28BQ9BUN5 200 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TBC1D10AQ9BXI6 508 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 GON7Q9BXV9 100 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ATG10Q9H0Y0 220 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SYNDIG1Q9H7V2 258 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 S100A14Q9HCY8 104 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ASCL3Q9NQ33 180 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NAGKQ9UJ70 344 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ENPP5Q9UJA9 477 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PPP1R3CQ9UQK1 317 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CLUHO75153 1309 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ZMYM6O95789 1325 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 DICER1Q9UPY3 1922 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CACNA1IQ9P0X4 2223 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TCF20Q9UGU0 1960 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 KDM5AP29375 1690 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NCAPD2Q15021 1401 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SETD5Q9C0A6 1442 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ADAMTS12P58397 1594 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CAMSAP1Q5T5Y3 1602 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 IGLV7-46A0A075B6I9 117 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TCP10L2B9ZVM9 353 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 F8W036 122 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 DENRO43583 198 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 BCAS1O75363 584 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 B3GAT3O94766 335 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CCNB2O95067 398 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 IFNGP01579 166 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 OR8G3PP0DMU2 310 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RNH1P13489 461 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 DRD5P21918 477 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CALB2P22676 271 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CCND2P30279 289 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 FCGR2BP31994 310 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 FCGR2CP31995 323 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CHRNA3P32297 505 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RCVRNP35243 200 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 GPX4P36969 197 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TALDO1P37837 337 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 GABRA4P48169 554 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NT5C2P49902 561 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 XGP55808 180 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TAS2R60P59551 318 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 HILS1P60008 231 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ELAVL2Q12926 359 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RCN2Q14257 317 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM132DQ14C87 1099 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ZMYND11Q15326 602 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 MAPK11Q15759 364 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 MLF2Q15773 248 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 DUSP7Q16829 419 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 C5orf64Q2M2E5 130 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RFTN2Q52LD8 501 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF542PQ5EBM4 170 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ACER2Q5QJU3 275 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PIP5KL1Q5T9C9 394 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 OLFML2AQ68BL7 652 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms