RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 IGHV4-30-2A0A087WSY4 118 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 TCRBV9S1A1TA0A576 114 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 C1orf226A1L170 272 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 OR2M5A3KFT3 312 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 FAM159BA6NKW6 160 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 SS18L1O75177 396 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 SIX3O95343 332 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PLGP00747 810 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CD8AP01732 235 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ALDOAP04075 364 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 LTA4HP09960 611 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CTAGE8P0CG41 777 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 NR2F1P10589 423 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GFAPP14136 432 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PSMB1P20618 241 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 SSTR1P30872 391 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 EVI2BP34910 448 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ARL3P36405 182 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GP5P40197 560 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 SEC24CP53992 1094 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PNLIPRP2P54317 469 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ALDH18A1P54886 795 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 DR1Q01658 176 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 STX5Q13190 355 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GTF2H2Q13888 395 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GANABQ14697 944 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CTU2Q2VPK5 515 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PGGHGQ32M88 737 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF672Q499Z4 452 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF628Q5EBL2 1059 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 FAM219BQ5XKK7 198 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 FRG2Q64ET8 278 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GTF2H2CQ6P1K8 395 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 LETMD1Q6P1Q0 360 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PAGE2Q7Z2X7 111 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 COMMD6Q7Z4G1 85 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CPLX4Q7Z7G2 160 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ATG4DQ86TL0 474 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GGNQ86UU5 652 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ARMC8Q8IUR7 673 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CTAGE4Q8IX94 777 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 KLHL7Q8IXQ5 586 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CENPLQ8N0S6 344 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PLD6Q8N2A8 252 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF619Q8N2I2 560 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 METTL4Q8N3J2 472 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 TMCO5AQ8N6Q1 288 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 KBTBD8Q8NFY9 601 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 OR4N2Q8NGD1 307 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 OR52B6Q8NGF0 335 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 KCTD4Q8WVF5 259 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CDKL2Q92772 493 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 KAT2AQ92830 837 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GFM2Q969S9 779 aaKnown RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 S100PBPQ96BU1 408 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 NXNL1Q96CM4 212 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CNRIP1Q96F85 164 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 GMPPAQ96IJ6 420 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 HS6ST2Q96MM7 605 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 VSTM2LQ96N03 204 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF681Q96N22 645 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 FRG2BQ96QU4 278 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ADI1Q9BV57 179 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 BEX2Q9BXY8 128 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 RTN4RQ9BZR6 473 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 TRIM31Q9BZY9 425 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 STMN4Q9H169 189 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-207ENST00000557470 POFUT1Q9H488 388 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PRDM13Q9H4Q3 707 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 FOLH1BQ9HBA9 442 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ZBTB26Q9HCK0 441 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 PNPOQ9NVS9 261 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 FLRT3Q9NZU0 649 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ADAM29Q9UKF5 820 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 ACOT9Q9Y305 439 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 TENM1Q9UKZ4 2725 aa5.21□□□□□ -1.58
VPS33B-207ENST00000557470 CADP27708 2225 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 A0A1W2PP18 115 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SYCE1LA8MT33 242 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 OR7A17O14581 309 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SSX4O60224 188 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 FADS1O60427 444 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 GUCY1B2O75343 617 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 GCM2O75603 506 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 APOL3O95236 402 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 CLDN9O95484 217 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 CSF1P09603 554 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 COL6A2P12110 1019 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 CRABP2P29373 138 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SPRP35270 261 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 ARL1P40616 181 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 CASP9P55211 416 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 CTBP2P56545 445 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 RPS3AP61247 264 aaKnown RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 RPL11P62913 178 aaKnown RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 TRAF3Q13114 568 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 TSC22D1Q15714 1073 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 ADRM1Q16186 407 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SGCBQ16585 318 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 ERCC6LQ2NKX8 1250 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms