RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PRSS50Q9UI38 385 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ING1Q9UK53 422 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-221ENST00000556571 POU2F3Q9UKI9 436 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 SVEP1Q4LDE5 3571 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 TLDC2A0PJX2 215 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 OR5H1A6NKK0 313 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF724A8MTY0 619 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 H7C417 338 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 RSL1D1O76021 490 aaKnown RBP10.49□□□□□ -0.73
ACTN1-221ENST00000556571 GSTA1P08263 222 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 CSF3P09919 207 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 IGHV4-31P0DP07 118 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 BMP4P12644 408 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 COX5AP20674 150 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 USF1P22415 310 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-221ENST00000556571 IGHV1-2P23083 117 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 SLC7A1P30825 629 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 CCT5P48643 541 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 GZMKP49863 264 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 P2RX1P51575 399 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 FOXA1P55317 472 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 SUMO3P55854 103 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF117Q03924 483 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 RASGEF1BQ0VAM2 473 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 SLC22A25Q6T423 547 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 KLHL17Q6TDP4 642 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 SZRD1Q7Z422 152 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF100Q8IYN0 542 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 DEPDC4Q8N2C3 294 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 ARIH2OSQ8N7S6 290 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF527Q8NB42 609 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 ATP6V1C2Q8NEY4 427 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 PHOSPHO1Q8TCT1 267 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 C10orf105Q8TEF2 133 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 CIDECQ96AQ7 238 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-221ENST00000556571 EGLN2Q96KS0 407 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 MRGPRX4Q96LA9 322 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 BTBD2Q9BX70 525 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 HOXD1Q9GZZ0 328 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 MANSC1Q9H8J5 431 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 ICAM5Q9UMF0 924 aa10.49□□□□□ -0.73
ACTN1-221ENST00000556571 IGHV3-15A0A0B4J1V0 119 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 C9JVG2 144 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 H3BNH8 94 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 H3BQF6 201 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 CYTIPO60759 359 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 TBX19O60806 448 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 GLRA3O75311 464 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 SEC22BO75396 215 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 DHRS4L1P0CG22 281 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF16P17020 682 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-221ENST00000556571 PRKCAP17252 672 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 FABP6P51161 128 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 EFNA4P52798 201 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 POU6F2P78424 691 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-221ENST00000556571 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.73
ACTN1-221ENST00000556571 SELENBP1Q13228 472 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 KLHL26Q53HC5 615 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 CCNJQ5T5M9 372 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 ANKRD26P1Q6NSI1 321 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF544Q6NX49 715 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 CBLN3Q6UW01 205 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 LRIG3Q6UXM1 1119 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 GALNT5Q7Z7M9 940 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF433Q8N7K0 673 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-221ENST00000556571 CCNYL1Q8N7R7 359 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 CCDC63Q8NA47 563 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 GPR119Q8TDV5 335 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 EPS8L3Q8TE67 593 aaKnown RBP10.48□□□□□ -0.73
ACTN1-221ENST00000556571 HTRA1Q92743 480 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 ARL8AQ96BM9 186 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF775Q96BV0 537 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-221ENST00000556571 PPCDCQ96CD2 204 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 CCDC126Q96EE4 140 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 C16orf58Q96GQ5 468 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 PARD6BQ9BYG5 372 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 GSTO2Q9H4Y5 243 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 DUSP22Q9NRW4 184 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 ACSS1Q9NUB1 689 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-221ENST00000556571 KCNS2Q9ULS6 477 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 CARD8Q9Y2G2 431 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 MALRD1Q5VYJ5 2156 aa10.48□□□□□ -0.73
ACTN1-221ENST00000556571 YLPM1P49750 1951 aaKnown RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 A0A1W2PNR3 127 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 A0A1W2PPM1 405 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 GTPBP1O00178 669 aaKnown RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 COPEO14579 308 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 CRCPO75575 148 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 NUDT17P0C025 328 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 MYL2P10916 166 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 KRT4P19013 534 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 HNF1AP20823 631 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 ATP6V1C1P21283 382 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 IGFBP5P24593 272 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 EDNRAP25101 427 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 CD40P25942 277 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 FRKP42685 505 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF83P51522 516 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 NAA20P61599 178 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 CHRNB3Q05901 458 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms