RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TGFBR3Q03167 851 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 NIPAL3Q6P499 406 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 SAMD12Q8N8I0 201 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 TREX2Q9BQ50 279 aaPredicted RBP16.16■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF442Q9H7R0 627 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 HDHD5Q9BXW7 423 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 NOSIPQ9Y314 301 aaKnown RBP16.15■□□□□ 0.18
PTPN21-208ENST00000556564 TMEM184BQ9Y519 407 aaPredicted RBP16.15■□□□□ 0.18
PTPN21-208ENST00000556564 CCNKO75909 580 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 CD3GP09693 182 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 SLC2A5P22732 501 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 GLO1Q04760 184 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 UGT8Q16880 541 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 COX20Q5RI15 118 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 OR8J2Q8NGG1 315 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 ABCG2Q9UNQ0 655 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 USP22Q9UPT9 525 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 SLC16A7O60669 478 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 DCKP27707 260 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 SPNS2Q8IVW8 549 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 SLC2A12Q8TD20 617 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 CCDC107Q8WV48 283 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 WACQ9BTA9 647 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 VAMP1P23763 118 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 AWAT2Q6E213 333 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 OLIG3Q7RTU3 272 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 LSM14AQ8ND56 463 aaKnown RBP16.15■□□□□ 0.18
PTPN21-208ENST00000556564 OR2I1PQ8NGU4 316 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 ULBP2Q9BZM5 246 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 ACTR6Q9GZN1 396 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 ARHGAP33O14559 1287 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 IGHG1P01857 330 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 EPHA5P54756 1037 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 C17orf67Q0P5P2 114 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 TRIM46Q7Z4K8 759 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 SLC38A5Q8WUX1 472 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 CHRDQ9H2X0 955 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 STOML2Q9UJZ1 356 aa16.15■□□□□ 0.18
PTPN21-208ENST00000556564 DISC1C4P0D8 188 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 SLC43A1O75387 559 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 TPOP07202 933 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 TMEM225BP0DP42 221 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 LAS2Q8IYD9 372 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 TRIM63Q969Q1 353 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 KLHL15Q96M94 604 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 PIGQQ9BRB3 760 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 LYRM4Q9HD34 91 aa16.14■□□□□ 0.18
PTPN21-208ENST00000556564 TESQ9UGI8 421 aaKnown RBP16.14■□□□□ 0.18
PTPN21-208ENST00000556564 ISPDA4D126 451 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 TRIM64A6NGJ6 449 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 KDM4EB2RXH2 506 aaPredicted RBP16.14■□□□□ 0.17
PTPN21-208ENST00000556564 LCMT2O60294 686 aaKnown RBP16.14■□□□□ 0.17
PTPN21-208ENST00000556564 THBS2P35442 1172 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 CARD18P57730 90 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 MELKQ14680 651 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 VASNQ6EMK4 673 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 OR9K2Q8NGE7 335 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 C15orf40Q8WUR7 153 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 ENY2Q9NPA8 101 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 CASP8AP2Q9UKL3 1982 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 GFYI3L273 518 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 MTRF1O75570 445 aaKnown RBP16.14■□□□□ 0.17
PTPN21-208ENST00000556564 GPR85P60893 370 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 GABREP78334 506 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 GOLM1Q8NBJ4 401 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 CADM4Q8NFZ8 388 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 A0A1W2PPW3 197 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 KRBA1A5PL33 1030 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 TMEM71Q6P5X7 295 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 Q6ZSR9 355 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 ENDOVQ8N8Q3 282 aaKnown RBP16.14■□□□□ 0.17
PTPN21-208ENST00000556564 MUCL1Q96DR8 90 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 SLC17A4Q9Y2C5 497 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 SLC6A5Q9Y345 797 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 IGHV1OR15-9A0A0B4J2B8 117 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 PRAMEF25A6NGN4 478 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 SLITRK5O94991 958 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 CEBPGP53567 150 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 AP2S1P53680 142 aaPredicted RBP16.14■□□□□ 0.17
PTPN21-208ENST00000556564 SPHARQ15513 63 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 GUSBP11Q6P575 273 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 C12orf49Q9H741 205 aa16.14■□□□□ 0.17
PTPN21-208ENST00000556564 VSX1Q9NZR4 365 aaPredicted RBP16.14■□□□□ 0.17
PTPN21-208ENST00000556564 ARAFP10398 606 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 MISPQ8IVT2 679 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 EMC9Q9Y3B6 208 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 GRXCR2A6NFK2 248 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 RLN2P04090 185 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 HRGP04196 525 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 S100A10P60903 97 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 NKX3-2P78367 333 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 ACVR1Q04771 509 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 HBMQ6B0K9 141 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 GALNT15Q8N3T1 639 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 OR13C2Q8NGS9 318 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 SAP130Q9H0E3 1048 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 DEFB127Q9H1M4 99 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 OR52D1Q9H346 318 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 ZNF613Q6PF04 617 aa16.13■□□□□ 0.17
PTPN21-208ENST00000556564 TP53I13Q8NBR0 393 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms