RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ZIM3Q96PE6 472 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 HDHD5Q9BXW7 423 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 ROPN1BQ9BZX4 212 aaPredicted RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 NMUR2Q9GZQ4 415 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 ROPN1Q9HAT0 212 aaPredicted RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF701Q9NV72 531 aaPredicted RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 CSPG4Q6UVK1 2322 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 JMJD1CQ15652 2540 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 CFLARO15519 480 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF264O43296 627 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 PLAUP00749 431 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 G6PDP11413 515 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 VSNL1P62760 191 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 CBFBQ13951 182 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 TMEM176BQ3YBM2 270 aaPredicted RBP17.55■□□□□ 0.4
PRKCH-219ENST00000555906 C3orf33Q6P1S2 294 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 NUFIP2Q7Z417 695 aaKnown RBP17.55■□□□□ 0.4
PRKCH-219ENST00000555906 TUSC5Q8IXB3 177 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 SLC43A2Q8N370 569 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 OR5W2Q8NH69 310 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 NUDT8Q8WV74 236 aa17.55■□□□□ 0.4
PRKCH-219ENST00000555906 NOP53Q9NZM5 478 aaKnown RBP17.55■□□□□ 0.4
PRKCH-219ENST00000555906 PRKD3O94806 890 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 IL32P24001 234 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 SLC7A1P30825 629 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 ETV4P43268 484 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 CCR4P51679 360 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 CLDN8P56748 225 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 QPRTQ15274 297 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 SMU1Q2TAY7 513 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 PDZK1Q5T2W1 519 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 SFRP5Q5T4F7 317 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 ADAM5Q6NVV9 412 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 SDF2Q99470 211 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 USB1Q9BQ65 265 aaKnown RBP17.54■□□□□ 0.4
PRKCH-219ENST00000555906 POTEKPQ9BYX7 375 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 SERHL2Q9H4I8 314 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 BCO1Q9HAY6 547 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 KLHL9Q9P2J3 617 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 RNF115Q9Y4L5 304 aa17.54■□□□□ 0.4
PRKCH-219ENST00000555906 RNF103-CHMP3A0A140T963 221 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 SERINC4A6NH21 518 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 DUXAA6NLW8 204 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 ESPNB1AK53 854 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 SMAD7O15105 426 aaKnown RBP17.53■□□□□ 0.4
PRKCH-219ENST00000555906 TYROBPO43914 113 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 DNAJA2O60884 412 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 CNOT4O95628 575 aaKnown RBP17.53■□□□□ 0.4
PRKCH-219ENST00000555906 YES1P07947 543 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 RAC3P60763 192 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 RPS26P62854 115 aaKnown RBP17.53■□□□□ 0.4
PRKCH-219ENST00000555906 EMX2Q04743 252 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 SKP2Q13309 424 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 P2RY6Q15077 328 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF141Q15928 474 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 ATP6V1C2Q8NEY4 427 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 RFWD2Q8NHY2 731 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 AENQ8WTP8 325 aaKnown RBP17.53■□□□□ 0.4
PRKCH-219ENST00000555906 AKAP1Q92667 903 aaKnown RBP eCLIP17.53■□□□□ 0.4
PRKCH-219ENST00000555906 KISS1RQ969F8 398 aaPredicted RBP17.53■□□□□ 0.4
PRKCH-219ENST00000555906 ARL8AQ96BM9 186 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF524Q96C55 264 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 SLC35G5Q96KT7 338 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 PSD2Q9BQI7 771 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF350Q9GZX5 532 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 NGBQ9NPG2 151 aa17.53■□□□□ 0.4
PRKCH-219ENST00000555906 CADP27708 2225 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 RNASET2O00584 256 aaKnown RBP17.52■□□□□ 0.4
PRKCH-219ENST00000555906 CREB1P16220 341 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 ENPP1P22413 925 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 RPS4XP62701 263 aaKnown RBP17.52■□□□□ 0.4
PRKCH-219ENST00000555906 TAB1Q15750 504 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 EMBQ6PCB8 327 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 CLECL1Q8IZS7 167 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 MIPOL1Q8TD10 442 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 OIT3Q8WWZ8 545 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 ST8SIA1Q92185 356 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 LAT2Q9GZY6 243 aa17.52■□□□□ 0.4
PRKCH-219ENST00000555906 ESRP2Q9H6T0 727 aaKnown RBP17.52■□□□□ 0.4
PRKCH-219ENST00000555906 ING1Q9UK53 422 aaPredicted RBP17.52■□□□□ 0.4
PRKCH-219ENST00000555906 IGHV3-15A0A0B4J1V0 119 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 A0A1W2PNR3 127 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 SMAD9O15198 467 aaKnown RBP17.51■□□□□ 0.39
PRKCH-219ENST00000555906 STX11O75558 287 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 H6PDO95479 791 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 MATN1P21941 496 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 ATP5J2P56134 94 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 ITGADQ13349 1161 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 TSC22D1Q15714 1073 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 GPR68Q15743 365 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 PDCD2Q16342 344 aaPredicted RBP17.51■□□□□ 0.39
PRKCH-219ENST00000555906 PGS1Q32NB8 556 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 ARHGAP11BQ3KRB8 267 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 NCMAPQ5T1S8 102 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 OR4F3Q6IEY1 312 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 SEZ6L2Q6UXD5 910 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 Q6ZT83 130 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 C6orf120Q7Z4R8 191 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 OR8J2Q8NGG1 315 aa17.51■□□□□ 0.39
PRKCH-219ENST00000555906 RAB3IL1Q8TBN0 382 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms