RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 MDGA2Q7Z553 956 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SLC22A16Q86VW1 577 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ZDHHC13Q8IUH4 622 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 PQLC1Q8N2U9 271 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SVOPLQ8N434 492 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 KDF1Q8NAX2 398 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 MDS2Q8NDY4 140 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ELOA3Q8NG57 546 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 C9orf43Q8TAL5 461 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ADAMTS16Q8TE57 1224 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 RNF138Q8WVD3 245 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SNRNP27Q8WVK2 155 aaKnown RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SLC38A4Q969I6 547 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 EME1Q96AY2 570 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 MPP4Q96JB8 637 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 OSBPL10Q9BXB5 764 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 AMBRA1Q9C0C7 1298 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 NDEL1Q9GZM8 345 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SH2D2AQ9NP31 389 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 C8orf4Q9NR00 106 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 AGPAT4Q9NRZ5 378 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 PLA2G3Q9NZ20 509 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 NDUFAF4Q9P032 175 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 STX18Q9P2W9 335 aaKnown RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 TESMINQ9Y4I5 508 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ANKRD11Q6UB99 2663 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 IGF2RP11717 2491 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 G3V3Y1 287 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 TNFRSF11BO00300 401 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 CHP2O43745 196 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 PEX1O43933 1283 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 MGRN1O60291 552 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 CXCR1P25024 350 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 GTF2E2P29084 291 aaKnown RBP10.21□□□□□ -0.77
SHMT2-220ENST00000555634 DNAJA1P31689 397 aaKnown RBP10.21□□□□□ -0.77
SHMT2-220ENST00000555634 SLC1A3P43003 542 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 DNASE1L1P49184 302 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 MEOX1P50221 254 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 POLR2HP52434 150 aaKnown RBP10.21□□□□□ -0.77
SHMT2-220ENST00000555634 DSCR4P56555 118 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-220ENST00000555634 GPR85P60893 370 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF169Q14929 603 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-220ENST00000555634 QPRTQ15274 297 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 OR1Q1Q15612 314 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 TRIP10Q15642 601 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 TBR1Q16650 682 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF468Q5VIY5 522 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-220ENST00000555634 RAET1LQ5VY80 246 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 BICRALQ6AI39 1079 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 TIGD3Q6B0B8 471 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 DESI1Q6ICB0 168 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 C5orf46Q6UWT4 87 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 IGFL3Q6UXB1 125 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 GRINAQ7Z429 371 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 HIPK1Q86Z02 1210 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 CDK20Q8IZL9 346 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 LSMEM1Q8N8F7 131 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ICA1LQ8NDH6 482 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 OR2M7Q8NG81 312 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 OR14L1PQ8NHC6 308 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 EXTL1Q92935 676 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ARSGQ96EG1 525 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 SLC41A3Q96GZ6 507 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 MRGPRX4Q96LA9 322 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 FRMD6Q96NE9 622 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 SIGLEC12Q96PQ1 595 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 EPYCQ99645 322 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 C9orf16Q9BUW7 83 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 KLHL4Q9C0H6 718 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF556Q9HAH1 456 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 C12orf10Q9HB07 376 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ZFP64Q9NPA5 681 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ENOPH1Q9UHY7 261 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 SLC7A7Q9UM01 511 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 ICAM5Q9UMF0 924 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 C15orf41Q9Y2V0 281 aa10.21□□□□□ -0.77
SHMT2-220ENST00000555634 KIAA1549Q9HCM3 1950 aa10.21□□□□□ -0.78
SHMT2-220ENST00000555634 A0A1W2PRQ8 180 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 GJE1A6NN92 205 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 ACACBO00763 2458 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 TFECO14948 347 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-220ENST00000555634 MPDZO75970 2070 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 CCNB2O95067 398 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 CAPNS1P04632 268 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 ZNF17P17021 662 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 ZNF24P17028 368 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 CDH2P19022 906 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-220ENST00000555634 FPR1P21462 350 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 FKBP2P26885 142 aaKnown RBP10.2□□□□□ -0.78
SHMT2-220ENST00000555634 DPP4P27487 766 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 ELK4P28324 431 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 SRD5A2P31213 254 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 RBM34P42696 430 aaKnown RBP10.2□□□□□ -0.78
SHMT2-220ENST00000555634 YAP1P46937 504 aaKnown RBP10.2□□□□□ -0.78
SHMT2-220ENST00000555634 MAP2K6P52564 334 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 ZNF136P52737 540 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 GAS1P54826 345 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 SLC34A1Q06495 639 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 MERTKQ12866 999 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 DGCR6Q14129 220 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms