RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 WDR4P57081 412 aaKnown RBP12.34□□□□□ -0.43
PCNX4-209ENST00000555569 PPP2R2AP63151 447 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 SELENBP1Q13228 472 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 CBFBQ13951 182 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 QPRTQ15274 297 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 ZNF239Q16600 458 aaKnown RBP12.34□□□□□ -0.43
PCNX4-209ENST00000555569 TMEM176BQ3YBM2 270 aaPredicted RBP12.34□□□□□ -0.43
PCNX4-209ENST00000555569 SLC25A53Q5H9E4 307 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 ATAD3BQ5T9A4 648 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 ANKRD34AQ69YU3 496 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 HEPHL1Q6MZM0 1159 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 OGFOD2Q6N063 350 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 OLIG3Q7RTU3 272 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 ATP6V1C2Q8NEY4 427 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 XAGE5Q8WWM1 108 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 ROBO4Q8WZ75 1007 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 CPNE4Q96A23 557 aaPredicted RBP12.34□□□□□ -0.43
PCNX4-209ENST00000555569 PIK3IP1Q96FE7 263 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 ZC3HAV1LQ96H79 300 aaKnown RBP12.34□□□□□ -0.43
PCNX4-209ENST00000555569 REXO5Q96IC2 774 aaKnown RBP12.34□□□□□ -0.43
PCNX4-209ENST00000555569 MRGPRX4Q96LA9 322 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 SRXN1Q9BYN0 137 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 LAT2Q9GZY6 243 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 FANCFQ9NPI8 374 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 KCNE5Q9UJ90 142 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 MKLN1Q9UL63 735 aa12.34□□□□□ -0.43
PCNX4-209ENST00000555569 FLNAP21333 2647 aaKnown RBP12.34□□□□□ -0.43
PCNX4-209ENST00000555569 CENPVL1A0A0U1RR11 272 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 UGT2B17O75795 530 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 CYP7B1O75881 506 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 NTN1O95631 604 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 CSTAP01040 98 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 GUSBP08236 651 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 ALDOCP09972 364 aaKnown RBP12.33□□□□□ -0.44
PCNX4-209ENST00000555569 NID1P14543 1247 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 CD53P19397 219 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 CHI3L1P36222 383 aaPredicted RBP12.33□□□□□ -0.44
PCNX4-209ENST00000555569 NME5P56597 212 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 SKP2Q13309 424 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 RNPS1Q15287 305 aaKnown RBP12.33□□□□□ -0.44
PCNX4-209ENST00000555569 FAM174BQ3ZCQ3 159 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 SAXO2Q658L1 398 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 TNFAIP8L2Q6P589 184 aaPredicted RBP12.33□□□□□ -0.44
PCNX4-209ENST00000555569 BEND4Q6ZU67 534 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 SPATA19Q7Z5L4 167 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 STK32CQ86UX6 486 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 MGARPQ8TDB4 240 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 RNF128Q8TEB7 428 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 ZFP90Q8TF47 636 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 ABHD3Q8WU67 409 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 RAB8BQ92930 207 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 ARL8AQ96BM9 186 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 ZNF524Q96C55 264 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 NEURL3Q96EH8 262 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 TEX37Q96LM6 180 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 CCDC115Q96NT0 180 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 SLC35A5Q9BS91 424 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 COQ10BQ9H8M1 238 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 POLE3Q9NRF9 147 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 AIG1Q9NVV5 245 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 THAP1Q9NVV9 213 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 BTNL2Q9UIR0 455 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 WDR45Q9Y484 360 aa12.33□□□□□ -0.44
PCNX4-209ENST00000555569 TRPC5OSA6NMA1 111 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 ETV2O00321 342 aaPredicted RBP12.32□□□□□ -0.44
PCNX4-209ENST00000555569 HDAC3O15379 428 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 KIAA0513O60268 411 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 DNAJA2O60884 412 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 PPP3CBP16298 524 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 KHKP50053 298 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 UFM1P61960 85 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 FOXD4Q12950 439 aaPredicted RBP12.32□□□□□ -0.44
PCNX4-209ENST00000555569 STAC2Q6ZMT1 411 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 C22orf34Q6ZV56 151 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 EIF3MQ7L2H7 374 aaKnown RBP12.32□□□□□ -0.44
PCNX4-209ENST00000555569 FCRLAQ7L513 359 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 OIT3Q8WWZ8 545 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 ROPN1LQ96C74 230 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 MARK4Q96L34 752 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 THUMPD3Q9BV44 507 aaKnown RBP12.32□□□□□ -0.44
PCNX4-209ENST00000555569 C12orf49Q9H741 205 aa12.32□□□□□ -0.44
PCNX4-209ENST00000555569 BEX4Q9NWD9 120 aaPredicted RBP12.32□□□□□ -0.44
PCNX4-209ENST00000555569 MARCOQ9UEW3 520 aaPredicted RBP12.32□□□□□ -0.44
PCNX4-209ENST00000555569 RAI1Q7Z5J4 1906 aaPredicted RBP12.31□□□□□ -0.44
PCNX4-209ENST00000555569 ZNF469Q96JG9 3925 aaPredicted RBP12.31□□□□□ -0.44
PCNX4-209ENST00000555569 GOLGA8QA0A0J9YX86 632 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 A0A1W2PNR3 127 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 GOLGA8OA6NCC3 632 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 CCDC154A6NI56 674 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 C9JVG2 144 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 GOLGA8NF8WBI6 632 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 SNNO75324 88 aaPredicted RBP12.31□□□□□ -0.44
PCNX4-209ENST00000555569 ERLIN1O75477 346 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 PRKD3O94806 890 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 THBDP07204 575 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 UBTFL6P0CB48 400 aaPredicted RBP12.31□□□□□ -0.44
PCNX4-209ENST00000555569 KITP10721 976 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 PGCP20142 388 aa12.31□□□□□ -0.44
PCNX4-209ENST00000555569 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms