RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ELAVL4P26378 380 aaKnown RBP9.81□□□□□ -0.84
TDP1-211ENST00000555178 VHLP40337 213 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 LIMS1P48059 325 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 TMPRSS3P57727 454 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 OR1Q1Q15612 314 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 OR1C1Q15619 314 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 ZBTB49Q6ZSB9 765 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 NUP54Q7Z3B4 507 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 GDF7Q7Z4P5 450 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 CADM2Q8N3J6 435 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 SLC15A4Q8N697 577 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 KDF1Q8NAX2 398 aaPredicted RBP9.81□□□□□ -0.84
TDP1-211ENST00000555178 MDS2Q8NDY4 140 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 SLC7A13Q8TCU3 470 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 PAQR8Q8TEZ7 354 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 TMCO6Q96DC7 493 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 METTL7AQ9H8H3 244 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 MED11Q9P086 117 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 PDP1Q9P0J1 537 aaPredicted RBP9.81□□□□□ -0.84
TDP1-211ENST00000555178 SLC7A7Q9UM01 511 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 SLC35A3Q9Y2D2 325 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 EPG5Q9HCE0 2579 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 IGSF10Q6WRI0 2623 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 SVILO95425 2214 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 KALRNO60229 2985 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 A0A1W2PQD3 144 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 C7orf72A4D263 438 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 SHISA8B8ZZ34 492 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 GNB5O14775 395 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 ADAMDEC1O15204 470 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 LYPD3O95274 346 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 H1F0P07305 194 aaKnown RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 RFPL3SP0C7P2 107 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 FAM87AP0C7U9 286 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 NAGAP17050 411 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 DNAJA1P31689 397 aaKnown RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 GCKP35557 465 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 CYB561P49447 251 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 PSPHP78330 225 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 EPS8Q12929 822 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 MFAP5Q13361 173 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 BROXQ5VW32 411 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 SHQ1Q6PI26 577 aaKnown RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 RANBP3LQ86VV4 465 aaPredicted RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 CMIPQ8IY22 773 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 OFCC1Q8IZS5 231 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 WDSUB1Q8N9V3 476 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 PSD4Q8NDX1 1056 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 OR5K1Q8NHB7 308 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 RNF217Q8TC41 542 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 SLC41A3Q96GZ6 507 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 DHRS1Q96LJ7 313 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 FNDC11Q9BVV2 318 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 KLHL4Q9C0H6 718 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 TESQ9UGI8 421 aaKnown RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 FBXL2Q9UKC9 423 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 ICAM5Q9UMF0 924 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 A0A1B0GWA3 101 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 DLGAP1O14490 977 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 CDC40O60508 579 aaKnown RBP eCLIP9.8□□□□□ -0.84
TDP1-211ENST00000555178 FPR1P21462 350 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 LCN1P31025 176 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 ADH7P40394 386 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 IDH2P48735 452 aaKnown RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 COL28A1Q2UY09 1125 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 SLC22A10Q63ZE4 541 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 PODNL1Q6PEZ8 512 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 IGFL2Q6UWQ7 119 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 CYP4Z1Q86W10 505 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 ZDHHC13Q8IUH4 622 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 P3H2Q8IVL5 708 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 PIK3C3Q8NEB9 887 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 MAGEE2Q8TD90 523 aaPredicted RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 TMEM255BQ8WV15 326 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 TTC9Q92623 222 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 ABHD17AQ96GS6 310 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 CNTNAP3BQ96NU0 1288 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 GNRHR2Q96P88 292 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 ALPK1Q96QP1 1244 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 EPYCQ99645 322 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 SMAD5Q99717 465 aaKnown RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 UTP23Q9BRU9 249 aaKnown RBP9.8□□□□□ -0.84
TDP1-211ENST00000555178 FUZQ9BT04 418 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 MFRPQ9BY79 579 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 CNTNAP3Q9BZ76 1288 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 RASSF4Q9H2L5 321 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 ARMC7Q9H6L4 198 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 LUZP4Q9P127 313 aa9.8□□□□□ -0.84
TDP1-211ENST00000555178 OR5H15A6NDH6 313 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 H3BNH8 94 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 PIP5K1CO60331 668 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 MITFO75030 526 aaPredicted RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 RASAL1O95294 804 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 POU2F1P14859 743 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 HOXB6P17509 224 aaKnown RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 PMP22Q01453 160 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 BORAQ6PGQ7 559 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 RTL4Q6ZR62 310 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 PRSS27Q9BQR3 290 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 OSBPL11Q9BXB4 747 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms