RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 COL4A4P53420 1690 aaPredicted RBP11.03□□□□□ -0.64
XRCC3-208ENST00000554811 TEX13CA0A0J9YWL9 993 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 H7C1C5 153 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 HRGP04196 525 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 RLN1P04808 185 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 LCN6P62502 163 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 GLYR1Q49A26 553 aaPredicted RBP11.02□□□□□ -0.64
XRCC3-208ENST00000554811 FAM109BQ6ICB4 259 aaPredicted RBP11.02□□□□□ -0.64
XRCC3-208ENST00000554811 SLC25A25Q6KCM7 469 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 RASSF6Q6ZTQ3 369 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 FGD2Q7Z6J4 655 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 CNOT9Q92600 299 aaKnown RBP11.02□□□□□ -0.64
XRCC3-208ENST00000554811 HS6ST2Q96MM7 605 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 C19orf43Q9BQ61 176 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 RNF32Q9H0A6 362 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 IL21RQ9HBE5 538 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 PAK6Q9NQU5 681 aaPredicted RBP11.02□□□□□ -0.64
XRCC3-208ENST00000554811 MARK1Q9P0L2 795 aa11.02□□□□□ -0.64
XRCC3-208ENST00000554811 MYEF2Q9P2K5 600 aaKnown RBP11.02□□□□□ -0.64
XRCC3-208ENST00000554811 ASXL3Q9C0F0 2248 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 TRBV2A0A0J9YWF9 115 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 IMPA2O14732 288 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 RDH16O75452 317 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 EVX1P49640 407 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 DGCR2P98153 550 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 TFF2Q03403 129 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 ZNF267Q14586 743 aaPredicted RBP11.02□□□□□ -0.65
XRCC3-208ENST00000554811 RFLNBQ8N5W9 214 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 OR4D9Q8NGE8 314 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 OR5J2Q8NH18 312 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 APOBEC4Q8WW27 367 aaKnown RBP11.02□□□□□ -0.65
XRCC3-208ENST00000554811 SMPDL3BQ92485 455 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 OR14A2Q96R54 314 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 SRA1Q9HD15 236 aaKnown RBP11.02□□□□□ -0.65
XRCC3-208ENST00000554811 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.65
XRCC3-208ENST00000554811 CBLCQ9ULV8 474 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 AP1M2Q9Y6Q5 423 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM129A0AVI4 362 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 CASC3O15234 703 aaKnown RBP11.02□□□□□ -0.65
XRCC3-208ENST00000554811 ZNF3P17036 446 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 OMPP47874 163 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 PPP2CBP62714 309 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 PPP2CAP67775 309 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 GALK2Q01415 458 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 TPBGQ13641 420 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 ARHGAP19Q14CB8 494 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 ZMYND11Q15326 602 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM35AQ53FP2 167 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 ALG10BQ5I7T1 473 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 MFSD12Q6NUT3 480 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 ARMC6Q6NXE6 501 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 OR4N2Q8NGD1 307 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 HERVK_113Q902F9 699 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 DIO2Q92813 273 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 HSPA12BQ96MM6 686 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 CLEC4MQ9H2X3 399 aaPredicted RBP11.02□□□□□ -0.65
XRCC3-208ENST00000554811 WASH6PQ9NQA3 447 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 TESQ9UGI8 421 aaKnown RBP11.02□□□□□ -0.65
XRCC3-208ENST00000554811 FLVCR2Q9UPI3 526 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 IER3IP1Q9Y5U9 82 aa11.02□□□□□ -0.65
XRCC3-208ENST00000554811 TRAPPC13A5PLN9 417 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 IDSB3KWA1 339 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 ERP29P30040 261 aaKnown RBP11.01□□□□□ -0.65
XRCC3-208ENST00000554811 ADH7P40394 386 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 RRAS2P62070 204 aaPredicted RBP11.01□□□□□ -0.65
XRCC3-208ENST00000554811 ABATP80404 500 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 BCL2A1Q16548 175 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 DCST2Q5T1A1 773 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 SFXN4Q6P4A7 337 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 C11orf88Q6PI97 169 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 OOSP2Q86WS3 158 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 LINC00471Q8N535 108 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 NATD1Q8N6N6 113 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 HHIPL1Q96JK4 782 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 MS4A4EQ96PG1 132 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 MTHFD2LQ9H903 347 aaPredicted RBP11.01□□□□□ -0.65
XRCC3-208ENST00000554811 HRASLS2Q9NWW9 162 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 LIPT1Q9Y234 373 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 KHNYNO15037 678 aaKnown RBP11.01□□□□□ -0.65
XRCC3-208ENST00000554811 P2RX6O15547 441 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 STX11O75558 287 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 HOXB2P14652 356 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 STOMP27105 288 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 STAT5AP42229 794 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 AGBL4Q5VU57 503 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 BICRALQ6AI39 1079 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 ZAR1Q86SH2 424 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 RBM18Q96H35 190 aaKnown RBP11.01□□□□□ -0.65
XRCC3-208ENST00000554811 TSSK2Q96PF2 358 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 OR2M4Q96R27 311 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 APOOQ9BUR5 198 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 OR6C2Q9NZP2 312 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 KNTC1P50748 2209 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 UNC13CQ8NB66 2214 aa11.01□□□□□ -0.65
XRCC3-208ENST00000554811 TRDV1A0A1B0GX56 115 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TSPAN11A1L157 253 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 PCP4L1A6NKN8 68 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 CHURC1-FNTBB4DL54 471 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 FZD7O75084 574 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms