RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 KRR1Q13601 381 aaKnown RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 LARS2Q15031 903 aaKnown RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 NDUFAF6Q330K2 333 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 MINDY4Q4G0A6 757 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 PAMR1Q6UXH9 720 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CASP12Q6UXS9 341 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 RAB43Q86YS6 212 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 OR8H2Q8N162 312 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CDRT4Q8N9R6 151 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 OR2I1PQ8NGU4 316 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 GRHL3Q8TE85 626 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 DEDD2Q8WXF8 326 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 SLC41A3Q96GZ6 507 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 A3GALT2U3KPV4 340 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 TLCD2A6NGC4 264 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 OR6C70A6NIJ9 312 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 GNB5O14775 395 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 SRPX2O60687 465 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 MTRF1O75570 445 aaKnown RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 SLC35E2P0CK97 266 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 S1PR1P21453 382 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 HTR2AP28223 471 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 PRKAR1BP31321 381 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CSF2RBP32927 897 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ILKQ13418 452 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 PDZK1Q5T2W1 519 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CYP4Z2PQ8N1L4 340 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF321PQ8N8H1 164 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 OR8D4Q8NGM9 314 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF350Q9GZX5 532 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CACYBPQ9HB71 228 aaKnown RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ATXN7L1Q9ULK2 861 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 PLCL2Q9UPR0 1127 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ARRDC5A6NEK1 342 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 LOC110117498-PIK3R3F6TDL0 507 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 HRO43593 1189 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 OR2B3O76000 313 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CDK1P06493 297 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 PSKH1P11801 424 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF250P15622 560 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CD1CP29017 333 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 EEF1A1P68104 462 aaKnown RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 PSG6Q00889 435 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 FLYWCH1Q4VC44 716 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 WDR88Q6ZMY6 472 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 SHISA6Q6ZSJ9 500 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 SLC34A3Q8N130 599 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF619Q8N2I2 560 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CAMKK1Q8N5S9 505 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CLDN23Q96B33 292 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CTHRC1Q96CG8 243 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 NUDT22Q9BRQ3 303 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 HDHD5Q9BXW7 423 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 SYNDIG1Q9H7V2 258 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CLN6Q9NWW5 311 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 EIF3KQ9UBQ5 218 aaKnown RBP10.81□□□□□ -0.68
SHMT2-212ENST00000554467 CLDN16Q9Y5I7 305 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 TP53BP1Q12888 1972 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 IGHV1OR21-1A0A087WYE8 117 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SMLR1H3BR10 107 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 NOS1APO75052 506 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 RPLP0P05388 317 aaKnown RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 ADORA3P0DMS8 318 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 GNSP15586 552 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SOX3P41225 446 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF136P52737 540 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 BNC1Q01954 994 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PLAURQ03405 335 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 FAM53BQ14153 422 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SLC30A6Q6NXT4 461 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 C17orf82Q86X59 251 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 FAM174AQ8TBP5 190 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 IPCEF1Q8WWN9 437 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 CNOT9Q92600 299 aaKnown RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 TSLPQ969D9 159 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 TMEM203Q969S6 136 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PTCHD1Q96NR3 888 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 DGAT2Q96PD7 388 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 FOLH1BQ9HBA9 442 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PNO1Q9NRX1 252 aaKnown RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SLC23A1Q9UHI7 598 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 CLEC2DQ9UHP7 191 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SYT5O00445 386 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 ADAM11O75078 769 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 FOLR1P15328 257 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SLC9A3P48764 834 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 EMDP50402 254 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 TRAM2Q15035 370 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF79Q15937 498 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 NDUFA9Q16795 377 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PRAMEF8Q5VWM4 474 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PRAMEF7Q5VXH5 474 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PAQR6Q6TCH4 344 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 GJD3Q8N144 294 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 UBE2J2Q8N2K1 259 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PFN4Q8NHR9 129 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 ZDHHC12Q96GR4 267 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 A0A087WV62 115 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms