RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RPL13AP40429 203 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 GYG1P46976 350 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 LEPRP48357 1165 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 ARRB1P49407 418 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 ACLYP53396 1101 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 XGP55808 180 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 OR1D5P58170 312 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 HERV-K104P61576 105 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 RAB11AP62491 216 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 TPM4P67936 248 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 OGDHQ02218 1023 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 MFGE8Q08431 387 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 BST2Q10589 180 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 TRDNQ13061 729 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 EIF2B1Q14232 305 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 SLC17A1Q14916 467 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ATXN7L3Q14CW9 347 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 STK38Q15208 465 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 RAB11BQ15907 218 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 MRPL23Q16540 153 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 HNRNPA1L2Q32P51 320 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 ZNF829Q3KNS6 432 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 FAM106AQ4KMX7 169 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 TP53I3Q53FA7 332 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 BEX5Q5H9J7 111 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 C6orf226Q5I0X4 101 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 SLC25A30Q5SVS4 291 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 C6orf183Q5T699 404 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 METTL11BQ5VVY1 283 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 FAM71F2Q6NXP2 309 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ZNF343Q6P1L6 599 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 BTNL3Q6UXE8 466 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 SCARA5Q6ZMJ2 495 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CHMP1BQ7LBR1 199 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 LINC00523Q86TU6 105 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ERI1Q8IV48 349 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 ZNF584Q8IVC4 421 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 MICU2Q8IYU8 434 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 DND1Q8IYX4 353 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 KIRREL3Q8IZU9 778 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 Q8N377 158 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 MTURNQ8N3F0 131 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ASCC1Q8N9N2 400 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 OR1L6Q8NGR2 347 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 OR1B1Q8NGR6 318 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 OR13F1Q8NGS4 319 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 GPX8Q8TED1 209 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 APOBEC4Q8WW27 367 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 LIPHQ8WWY8 451 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 SLC38A4Q969I6 547 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 TMIGD2Q96BF3 282 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 RAB3CQ96E17 227 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 NRBF2Q96F24 287 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CERS2Q96G23 380 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 SERAC1Q96JX3 654 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 C7orf34Q96L11 122 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 C2orf48Q96LS8 159 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 IL4I1Q96RQ9 567 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 NKX3-1Q99801 234 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 PARD6BQ9BYG5 372 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 SLC25A51Q9H1U9 297 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 NARFLQ9H6Q4 476 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 C8orf33Q9H7E9 229 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 MTHFD2LQ9H903 347 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 C20orf96Q9NUD7 363 aaPredicted RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 INTS9Q9NV88 658 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 BFARQ9NZS9 450 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 ANAPC7Q9UJX3 599 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 RNF6Q9Y252 685 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 RHBDD3Q9Y3P4 386 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 WIPI2Q9Y4P8 454 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 CSDC2Q9Y534 153 aaKnown RBP1.9□□□□□ -2.11
SRP54-204ENST00000553923 NEDD4P46934 1319 aa1.9□□□□□ -2.11
SRP54-204ENST00000553923 RPAP1Q9BWH6 1393 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 hCG_38984A0A1B0GV85 526 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 FBLL1A6NHQ2 334 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 HSBP1L1C9JCN9 74 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ZNF701M0R085 212 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 PSMD11O00231 422 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 DLGAP1O14490 977 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 TRAFD1O14545 582 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 OR7A17O14581 309 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ZNF195O14628 629 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PPP1R2P9O14990 202 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 YKT6O15498 198 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 RRP8O43159 456 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 PPIHO43447 177 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 EFNA2O43921 213 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 SRPX2O60687 465 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 E2F6O75461 281 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 B3GAT3O94766 335 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 FGF19O95750 216 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 GNA14O95837 355 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ANGPTL1O95841 491 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ECDO95905 644 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 P04436 131 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 SERPIND1P05546 499 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 TPM3P06753 285 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ANXA5P08758 320 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 IGFBP1P08833 259 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms