RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 HMGN2P46Q86SG4 172 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 MRGPRGQ86SM5 289 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 GRAMD2AQ8IUY3 354 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 SLC5A8Q8N695 610 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 PIK3C3Q8NEB9 887 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 ADOQ96SZ5 270 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 EPYCQ99645 322 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 CIB1Q99828 191 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 HHATLQ9HCP6 504 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 P4HTMQ9NXG6 502 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 FBXL4Q9UKA2 621 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 OAZ3Q9UMX2 235 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 SERINC4A6NH21 518 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 H0YJX3 145 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 MASP2O00187 686 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 WWP2O00308 870 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 PRKNO60260 465 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-208ENST00000553868 FMO6PO60774 539 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 SERPINA7P05543 415 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 CYP4B1P13584 511 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 RRM2P31350 389 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 ADH7P40394 386 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 HSPA13P48723 471 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 KLHL26Q53HC5 615 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 SHQ1Q6PI26 577 aaKnown RBP13.22□□□□□ -0.29
SHMT2-208ENST00000553868 Q6ZS92 163 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 NUP54Q7Z3B4 507 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 PACS2Q86VP3 889 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 DND1Q8IYX4 353 aaKnown RBP13.22□□□□□ -0.29
SHMT2-208ENST00000553868 PRR22Q8IZ63 422 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 CLIP4Q8N3C7 705 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 OR6T1Q8NGN1 323 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 OR4C3Q8NH37 302 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 THAP3Q8WTV1 239 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-208ENST00000553868 TMCO6Q96DC7 493 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 PRRC1Q96M27 445 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 FER1L6-AS2Q96M78 137 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 TACO1Q9BSH4 297 aaKnown RBP13.22□□□□□ -0.29
SHMT2-208ENST00000553868 FNDC11Q9BVV2 318 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 TESQ9UGI8 421 aaKnown RBP13.22□□□□□ -0.29
SHMT2-208ENST00000553868 KCNE5Q9UJ90 142 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 TESMINQ9Y4I5 508 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 VPS13CQ709C8 3753 aa13.22□□□□□ -0.29
SHMT2-208ENST00000553868 RTTNQ86VV8 2226 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 A0A1W2PQD3 144 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 PRAMEF25A6NGN4 478 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 DIRAS1O95057 198 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 GADD45GO95257 159 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 RASAL1O95294 804 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 OXSR1O95747 527 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-208ENST00000553868 EPPINO95925 133 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 CSTAP01040 98 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 H1F0P07305 194 aaKnown RBP13.21□□□□□ -0.29
SHMT2-208ENST00000553868 EDN3P14138 238 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 UQCRBP14927 111 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 CDH12P55289 794 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 TAS2R41P59536 307 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 RPP38P78345 283 aaKnown RBP13.21□□□□□ -0.29
SHMT2-208ENST00000553868 PPP4R4Q6NUP7 873 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 OPN5Q6U736 354 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 IZUMO2Q6UXV1 221 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 PLEKHM3Q6ZWE6 761 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 STK32CQ86UX6 486 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 MISPQ8IVT2 679 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 CBR4Q8N4T8 237 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 TOR1AIP2Q8NFQ8 470 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 PHF10Q8WUB8 498 aaKnown RBP13.21□□□□□ -0.29
SHMT2-208ENST00000553868 CCDC120Q96HB5 630 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 LMF1Q96S06 567 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 MCHR1Q99705 422 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 TBL1XR1Q9BZK7 514 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 PRDM4Q9UKN5 801 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 TMCC3Q9ULS5 477 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 YARS2Q9Y2Z4 477 aaKnown RBP13.21□□□□□ -0.29
SHMT2-208ENST00000553868 PCDHGB6Q9Y5F9 930 aa13.21□□□□□ -0.29
SHMT2-208ENST00000553868 CENPVL1A0A0U1RR11 272 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 TMEM200CA6NKL6 621 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 GTPBP1O00178 669 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ICOSLGO75144 302 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 OR2J2O76002 312 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 OR5F1O95221 314 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 HPRP00739 348 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 FBXO45P0C2W1 286 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 THRBP10828 461 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 UBL4AP11441 157 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 YAP1P46937 504 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 HMGA2P52926 109 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 TLE4Q04727 773 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ST3GAL3Q11203 375 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 IGFL3Q6UXB1 125 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 TSEN54Q7Z6J9 526 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 EPHX4Q8IUS5 362 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 LACC1Q8IV20 430 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 OFCC1Q8IZS5 231 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ARMC10Q8N2F6 343 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms