RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 C2orf72A6NCS6 295 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 CHP2O43745 196 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 NTN1O95631 604 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 FREM3P0C091 2139 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
APEX1-205ENST00000553555 CCR4P51679 360 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 RAD23AP54725 363 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 RPP38P78345 283 aaKnown RBP12.55□□□□□ -0.4
APEX1-205ENST00000553555 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.4
APEX1-205ENST00000553555 SNTA1Q13424 505 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 CRTC2Q53ET0 693 aaPredicted RBP12.55□□□□□ -0.4
APEX1-205ENST00000553555 C6orf52Q5T4I8 152 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 ZNF468Q5VIY5 522 aaPredicted RBP12.55□□□□□ -0.4
APEX1-205ENST00000553555 WBP2NLQ6ICG8 309 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 PGBD2Q6P3X8 592 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 ULK3Q6PHR2 472 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 LINC00114Q6XXX2 140 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 WDR88Q6ZMY6 472 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 DHRSXQ8N5I4 330 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 AQP11Q8NBQ7 271 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 CLEC1AQ8NC01 280 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 OR5W2Q8NH69 310 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 B4GALNT2Q8NHY0 566 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 PAQR8Q8TEZ7 354 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 TMEM255BQ8WV15 326 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 TFAP2CQ92754 450 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 NIPSNAP1Q9BPW8 284 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 TOR3AQ9H497 397 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 GALNT9Q9HCQ5 603 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 SDHAF3Q9NRP4 125 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 KRT84Q9NSB2 600 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 HPF1Q9NWY4 346 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 STMN3Q9NZ72 180 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 MSRB2Q9Y3D2 182 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
APEX1-205ENST00000553555 ARGFXA6NJG6 315 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 DENRO43583 198 aaKnown RBP12.54□□□□□ -0.4
APEX1-205ENST00000553555 PGCP20142 388 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ITPKBP27987 946 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 HLCSP50747 726 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 RRADP55042 308 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 SOX8P57073 446 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ADARB1P78563 741 aaKnown RBP12.54□□□□□ -0.4
APEX1-205ENST00000553555 CBFBQ13951 182 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 SLC36A3Q495N2 470 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 CMPK2Q5EBM0 449 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ALG10BQ5I7T1 473 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 SLC22A10Q63ZE4 541 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 SLC30A6Q6NXT4 461 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 C1orf94Q6P1W5 598 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ZNF730Q6ZMV8 503 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 RRM2BQ7LG56 351 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 PRICKLE2Q7Z3G6 844 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ZER1Q7Z7L7 766 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 GALNT5Q7Z7M9 940 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 BEST3Q8N1M1 668 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 RNF217Q8TC41 542 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 GPR119Q8TDV5 335 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 DNAJA4Q8WW22 397 aaPredicted RBP12.54□□□□□ -0.4
APEX1-205ENST00000553555 C3orf49Q96BT1 292 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ZNF524Q96C55 264 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 NTNG2Q96CW9 530 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 MPP4Q96JB8 637 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 SGCZQ96LD1 299 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 MBOAT4Q96T53 435 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ADI1Q9BV57 179 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 DGCR6LQ9BY27 220 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 ZNF556Q9HAH1 456 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 CPNE5Q9HCH3 593 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 TEKT2Q9UIF3 430 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 WIF1Q9Y5W5 379 aa12.54□□□□□ -0.4
APEX1-205ENST00000553555 DCHS1Q96JQ0 3298 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 ZNF891A8MT65 544 aaPredicted RBP12.53□□□□□ -0.4
APEX1-205ENST00000553555 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
APEX1-205ENST00000553555 ADAP00813 363 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 PRKAR1AP10644 381 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 POU2F1P14859 743 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 IL1RL1Q01638 556 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 SWT1Q5T5J6 900 aaKnown RBP12.53□□□□□ -0.4
APEX1-205ENST00000553555 OR5M10Q6IEU7 315 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 RTL4Q6ZR62 310 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 MBOAT2Q6ZWT7 520 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 GPALPP1Q8IXQ4 340 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 RNF113BQ8IZP6 322 aaKnown RBP12.53□□□□□ -0.4
APEX1-205ENST00000553555 GALNT16Q8N428 558 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 ZNF563Q8TA94 476 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 TMEM239Q8WW34 195 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 KCNE4Q8WWG9 221 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
APEX1-205ENST00000553555 HS6ST2Q96MM7 605 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 FRMD6Q96NE9 622 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 ANGPTL4Q9BY76 406 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 ADAM19Q9H013 955 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 Q9H521 79 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 PAPOLBQ9NRJ5 636 aaKnown RBP12.53□□□□□ -0.4
APEX1-205ENST00000553555 FAM118AQ9NWS6 357 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 SELENONQ9NZV5 590 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms