RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 Q6ZNB5 142 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 UBE3DQ7Z6J8 389 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PAQR7Q86WK9 346 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 SLC39A11Q8N1S5 342 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 CYB561A3Q8NBI2 242 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 UXS1Q8NBZ7 420 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 OR10H4Q8NGA5 316 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ABHD4Q8TB40 342 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 SLC5A11Q8WWX8 675 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 SUSD6Q92537 303 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 DIO2Q92813 273 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 C4orf36Q96KX1 117 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PRAP1Q96NZ9 151 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 RHBGQ9H310 441 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 XKR8Q9H6D3 395 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 LDAHQ9H6V9 325 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 WDR26Q9H7D7 661 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 NPDC1Q9NQX5 325 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 SPHK2Q9NRA0 654 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 C20orf141Q9NUB4 165 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 MGAT4CQ9UBM8 478 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 IL36AQ9UHA7 158 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 MOKQ9UQ07 419 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 AK6Q9Y3D8 172 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ASB4Q9Y574 426 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ARID1AO14497 2285 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 HIDE1A8MVS5 230 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 MCRIP1C9JLW8 97 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 J3QLW9 94 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 GALR3O60755 368 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PEX14O75381 377 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 KDM4BO94953 1096 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 IFNA16P05015 189 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 HMGN2P05204 90 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 CTSLP07711 333 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 RHOP08100 348 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF19P17023 458 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 HTR1FP30939 366 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PPM1AP35813 382 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 RPL35P42766 123 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 TAS2R41P59536 307 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ACSM1Q08AH1 577 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 TSPAN31Q12999 210 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PLA2G7Q13093 441 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 GPNMBQ14956 572 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PGGHGQ32M88 737 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF658BQ4V348 819 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 HENMT1Q5T8I9 393 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 DCAF12L2Q5VW00 463 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PYHIN1Q6K0P9 492 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 KIAA1211LQ6NV74 962 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 THSD4Q6ZMP0 1018 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 WDR88Q6ZMY6 472 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 FAM83HQ6ZRV2 1179 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 CMTM4Q8IZR5 234 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 BVESQ8NE79 360 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 OR5M1Q8NGP8 315 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 OR5AR1Q8NGP9 310 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 OR52N1Q8NH53 320 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 OR52I2Q8NH67 350 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 CXorf40AQ8TE69 158 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 OR5P2Q8WZ92 322 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 GHSRQ92847 366 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 MRPS24Q96EL2 167 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 LRIG1Q96JA1 1093 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ERMAPQ96PL5 475 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF607Q96SK3 696 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 GFI1Q99684 422 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 USB1Q9BQ65 265 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ADAT1Q9BUB4 502 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 SGPP1Q9BX95 441 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 IGFLR1Q9H665 355 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 HRASLSQ9HDD0 168 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ZCCHC3Q9NUD5 404 aaKnown RBP4.51□□□□□ -1.69
LIMA1-214ENST00000552783 ADAM30Q9UKF2 790 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 PPIL1Q9Y3C6 166 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 HCFC2Q9Y5Z7 792 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 RNF215Q9Y6U7 377 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 SEC16AO15027 2179 aa4.51□□□□□ -1.69
LIMA1-214ENST00000552783 CACNA1IQ9P0X4 2223 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 A0A1B0GVI7 797 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 IMPA2O14732 288 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 KIAA0355O15063 1070 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 PGRMC2O15173 223 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 MID1O15344 667 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 LCMT2O60294 686 aaKnown RBP4.5□□□□□ -1.69
LIMA1-214ENST00000552783 SELENOFO60613 162 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 SC5DO75845 299 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 RLN2P04090 185 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 FGF2P09038 288 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 SLC35G4P0C7Q5 338 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 PPP2R1BP30154 601 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 DCTDP32321 178 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 PYCR1P32322 319 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 CCR2P41597 374 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 MMP15P51511 669 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 CCR9P51686 369 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 B2MP61769 119 aa4.5□□□□□ -1.69
LIMA1-214ENST00000552783 HYAL4Q2M3T9 481 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms