RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 EPPINO95925 133 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 TYRP1P17643 537 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 BCL6P41182 706 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 SLC1A3P43003 542 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 OC90Q02509 493 aaPredicted RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 SLC9A5Q14940 896 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF628Q5EBL2 1059 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 FAAP20Q6NZ36 180 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 Q6ZS52 159 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 Q6ZSR6 202 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 NR2C2APQ86WQ0 139 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 PEX5LQ8IYB4 626 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 TBC1D19Q8N5T2 526 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 DEFB119Q8N690 84 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 ACOT4Q8N9L9 421 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 MFSD9Q8NBP5 474 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 PFN4Q8NHR9 129 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 ZFAND1Q8TCF1 268 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 ATF6BQ99941 703 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 TMEM168Q9H0V1 697 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 SLC35C2Q9NQQ7 365 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 SLC7A7Q9UM01 511 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 TNFSF14O43557 240 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 RPP14O95059 124 aaKnown RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 F3P13726 295 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 PSMB10P40306 273 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 MLLT3P42568 568 aaPredicted RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 PCBP4P57723 403 aaKnown RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 FGFBP1Q14512 234 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 MLC1Q15049 377 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 NDUFAF6Q330K2 333 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 KLHL22Q53GT1 634 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 LAMTOR1Q6IAA8 161 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 OR4C11Q6IEV9 310 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 SLC22A18ASQ8N1D0 253 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 FAM26EQ8N5C1 309 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 CLDN22Q8N7P3 220 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 OR5P2Q8WZ92 322 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 PTCHD1Q96NR3 888 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 WDFY2Q96P53 400 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 C1QTNF6Q9BXI9 259 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 POLDIP3Q9BY77 421 aaKnown RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 EVA1BQ9NVM1 165 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 ZSCAN32Q9NX65 697 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 TESQ9UGI8 421 aaKnown RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 SIRT4Q9Y6E7 314 aaPredicted RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 MDC1Q14676 2089 aaKnown RBP10.29□□□□□ -0.76
LINC00661-204ENST00000549354 AHCTF1Q8WYP5 2266 aa10.29□□□□□ -0.76
LINC00661-204ENST00000549354 E9PI62 339 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 PEX12O00623 359 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 CDC42EP2O14613 210 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 PRODHO43272 600 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 ORC5O43913 435 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 GATBO75879 557 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 ALPPP05187 535 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 ACP2P11117 423 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 POLR2CP19387 275 aaPredicted RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 CMPK1P30085 196 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 TSFMP43897 325 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 ELOAQ14241 798 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 WDR45BQ5MNZ6 344 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 SFRP4Q6FHJ7 346 aaPredicted RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 PAQR7Q86WK9 346 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 C10orf53Q8N6V4 93 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 NUP43Q8NFH3 380 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 IFT27Q9BW83 186 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 PPP1R3EQ9H7J1 279 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 STMN3Q9NZ72 180 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 KCMF1Q9P0J7 381 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 MYEF2Q9P2K5 600 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 MGAT4AQ9UM21 535 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 A0A0A6YYJ9 748 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 I3L521 148 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 NT5EP21589 574 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 PYCR1P32322 319 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 EVX1P49640 407 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 CCR6P51684 374 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 RRAS2P62070 204 aaPredicted RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 RPL6Q02878 288 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 MAB21L1Q13394 359 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 C1orf61Q13536 156 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 GPR176Q14439 515 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 KIR2DS3Q14952 304 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 TRMT12Q53H54 448 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 MRM1Q6IN84 353 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 SLC36A4Q6YBV0 504 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 QSOX2Q6ZRP7 698 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 OR13H1Q8NG92 308 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 SLC22A18Q96BI1 424 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 TOE1Q96GM8 510 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 AMDHD1Q96NU7 426 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 SLC38A2Q96QD8 506 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 DPCDQ9BVM2 203 aaPredicted RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 RNF32Q9H0A6 362 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 MED28Q9H204 178 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 ENAMQ9NRM1 1142 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 SF3B6Q9Y3B4 125 aaKnown RBP10.28□□□□□ -0.76
LINC00661-204ENST00000549354 SPEF1Q9Y4P9 236 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 OR5F1O95221 314 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 AIFM1O95831 613 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms