RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 LINC00032P0C843 101 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 PRKCAP17252 672 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 MAPK1P28482 360 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 SELENBP1Q13228 472 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 LASP1Q14847 261 aaKnown RBP11.41□□□□□ -0.58
PTCH1-218ENST00000548945 KANK2Q63ZY3 851 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 CBLN3Q6UW01 205 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 SEZ6L2Q6UXD5 910 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 DNM1P46Q6ZS02 220 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 BANPQ8N9N5 519 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 OR56A1Q8NGH5 318 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 GPR119Q8TDV5 335 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 ARL8AQ96BM9 186 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 PKNOX2Q96KN3 472 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 TRIM2Q9C040 744 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 SLCO5A1Q9H2Y9 848 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 BARX1Q9HBU1 254 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-218ENST00000548945 CARD8Q9Y2G2 431 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 MAGED1Q9Y5V3 778 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-218ENST00000548945 NPIPB9F8W1W9 429 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 GTPBP1O00178 669 aaKnown RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 EIF4E2O60573 245 aaKnown RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 TRIM13O60858 407 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 TP53P04637 393 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 SLC7A1P30825 629 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 OR3A2P47893 321 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 CCT3P49368 545 aaKnown RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 ATP12AP54707 1039 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 BSPH1Q075Z2 132 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 TSC22D1Q15714 1073 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 PGGHGQ32M88 737 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 LSM12Q3MHD2 195 aaKnown RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 GALNTL6Q49A17 601 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 DCST2Q5T1A1 773 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 ALKBH2Q6NS38 261 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 BHLHA15Q7RTS1 189 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 DTX2Q86UW9 622 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 P2RY8Q86VZ1 359 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 C10orf107Q8IVU9 208 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 TOR1AIP2Q8NFQ8 470 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 OR5W2Q8NH69 310 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 SFXN5Q8TD22 340 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 ADAMTS15Q8TE58 950 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 OR5P2Q8WZ92 322 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 MOAP1Q96BY2 351 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 OTUB1Q96FW1 271 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 CHMP6Q96FZ7 201 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 ZIM3Q96PE6 472 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 PSD2Q9BQI7 771 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 GATA5Q9BWX5 397 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 ATAD3AQ9NVI7 634 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 FAF1Q9UNN5 650 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-218ENST00000548945 LIPT1Q9Y234 373 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 DTNAQ9Y4J8 743 aa11.4□□□□□ -0.58
PTCH1-218ENST00000548945 GOLGA8QA0A0J9YX86 632 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 GOLGA8OA6NCC3 632 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 DPRXA6NFQ7 191 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF724A8MTY0 619 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF814B7Z6K7 855 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 GOLGA8NF8WBI6 632 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 OIP5O43482 229 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 CD5LO43866 347 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 CYTIPO60759 359 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 LYPLA1O75608 230 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-218ENST00000548945 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 LAMP1P11279 417 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 KRT4P19013 534 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 EFNA1P20827 205 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-218ENST00000548945 ENPP1P22413 925 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 ACVR1BP36896 505 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 IFFO1Q0D2I5 559 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 PCLAFQ15004 111 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 TOMM34Q15785 309 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-218ENST00000548945 UGT3A2Q3SY77 523 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 C3orf33Q6P1S2 294 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 CROCCP2Q86T23 111 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 KBTBD8Q8NFY9 601 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 OR7A2PQ8NGA2 310 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 TWIST2Q8WVJ9 160 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 COQ8BQ96D53 544 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 MUCL1Q96DR8 90 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 RADILQ96JH8 1075 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 PPP3R2Q96LZ3 170 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 TRAF4Q9BUZ4 470 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-218ENST00000548945 NMUR2Q9GZQ4 415 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 ALG2Q9H553 416 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 CXorf36Q9H7Y0 433 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 GPATCH2Q9NW75 528 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 ING1Q9UK53 422 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-218ENST00000548945 FIS1Q9Y3D6 152 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 TRAF6Q9Y4K3 522 aa11.39□□□□□ -0.59
PTCH1-218ENST00000548945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF264O43296 627 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 NPHS1O60500 1241 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 DNAJA2O60884 412 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 PGM3O95394 542 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 IFNA2P01563 188 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms