RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 OAFQ86UD1 273 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 STX12Q86Y82 276 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 GALNT13Q8IUC8 556 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 RBM45Q8IUH3 476 aaKnown RBP5.12□□□□□ -1.59
LIMA1-203ENST00000547825 RIMKLAQ8IXN7 391 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 INO80EQ8NBZ0 244 aaPredicted RBP5.12□□□□□ -1.59
LIMA1-203ENST00000547825 OR4M2Q8NGB6 313 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 WDR20Q8TBZ3 569 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 SPRYD4Q8WW59 207 aaPredicted RBP5.12□□□□□ -1.59
LIMA1-203ENST00000547825 SORCS1Q8WY21 1168 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 PEX13Q92968 403 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 CREB3L1Q96BA8 519 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 ZSWIM3Q96MP5 696 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 PSD2Q9BQI7 771 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 FAM83CQ9BQN1 747 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 ACTL8Q9H568 366 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 XKR8Q9H6D3 395 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 C14orf105Q9NVL8 296 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 NDUFAF4Q9P032 175 aa5.12□□□□□ -1.59
LIMA1-203ENST00000547825 OR6C75A6NL08 312 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 KDELR3O43731 214 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PRAMEF12O95522 483 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PRH1P02810 166 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 HMGN1P05114 100 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CEACAM5P06731 702 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ADRA2AP08913 450 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 RD3LP0DJH9 198 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 HSD3B1P14060 373 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 AMD1P17707 334 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CD53P19397 219 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 AHCYP23526 432 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 F8A1P23610 371 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SHC1P29353 583 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PDHA2P29803 388 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 DDOSTP39656 456 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 KIR2DL3P43628 341 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CSNK1DP48730 415 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 GZMKP49863 264 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SLC14A1Q13336 389 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 EIF4HQ15056 248 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SLC14A2Q15849 920 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 DUSP7Q16829 419 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SLC25A24Q6NUK1 477 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 FAM122CQ6P4D5 195 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 FAM198BQ6UWH4 519 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF852Q6ZMS4 543 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ESPNLQ6ZVH7 1005 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PRSS45Q7RTY3 260 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 NRMQ8IXM6 262 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PRR18Q8N4B5 295 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 OR2AP1Q8NGE2 309 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TM9SF4Q92544 642 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ISG20Q96AZ6 181 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 YIPF6Q96EC8 236 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 RNF32Q9H0A6 362 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 DDX31Q9H8H2 851 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 MED20Q9H944 212 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM27Q9HBJ8 222 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 MCCC2Q9HCC0 563 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ELOVL2Q9NXB9 296 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SLC23A1Q9UHI7 598 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 FBXL2Q9UKC9 423 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM5Q9Y2B1 443 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 A0A1W2PPL8 197 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF860A6NHJ4 632 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SCAMP2O15127 329 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 POLR1CO15160 346 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 POP7O75817 140 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 POP4O95707 220 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 MT-ND5P03915 603 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 HIST1H2ABP04908 130 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 GTF2F2P13984 249 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 JUPP14923 745 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ACVR2AP27037 513 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TLX1P31314 330 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 AQP2P41181 271 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PITPNBP48739 271 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PRR5P85299 388 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ST3GAL3Q11203 375 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SGCGQ13326 291 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 IL10RAQ13651 578 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SF3A2Q15428 464 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM69Q5SWH9 247 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 KHDRBS2Q5VWX1 349 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SAXO2Q658L1 398 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 BTN2A1Q7KYR7 527 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 HIST3H2AQ7L7L0 130 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 OR4N5Q8IXE1 308 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 APCDD1Q8J025 514 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM185AQ8NFB2 350 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 HIST1H2ACQ93077 130 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CD180Q99467 661 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 BCL2L14Q9BZR8 327 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SLC7A5P2Q9GIP4 190 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SLC25A18Q9H1K4 315 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PPA2Q9H2U2 334 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF639Q9UID6 485 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 NDRG4Q9ULP0 352 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PADI2Q9Y2J8 665 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 KLK4Q9Y5K2 254 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms