RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LURAP1Q96LR2 239 aa14.28□□□□□ -0.12
DDX54-204ENST00000546898 SLC38A1Q9H2H9 487 aa14.28□□□□□ -0.12
DDX54-204ENST00000546898 TPT1P8Q9HAU6 139 aa14.28□□□□□ -0.12
DDX54-204ENST00000546898 SLC6A13Q9NSD5 602 aa14.28□□□□□ -0.12
DDX54-204ENST00000546898 THUMPD1Q9NXG2 353 aaKnown RBP14.28□□□□□ -0.12
DDX54-204ENST00000546898 P2RX2Q9UBL9 471 aa14.28□□□□□ -0.12
DDX54-204ENST00000546898 MCTS1Q9ULC4 181 aaKnown RBP14.28□□□□□ -0.12
DDX54-204ENST00000546898 POLQO75417 2590 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 MSTNO14793 375 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 EDF1O60869 148 aaKnown RBP14.27□□□□□ -0.13
DDX54-204ENST00000546898 UBTFL6P0CB48 400 aaPredicted RBP14.27□□□□□ -0.13
DDX54-204ENST00000546898 PGCP20142 388 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 CAPN3P20807 821 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 PGM1P36871 562 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 KIR2DL3P43628 341 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 CPA2P48052 419 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 MVDP53602 400 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 CHRNEQ04844 493 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 SQLEQ14534 574 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 QPRTQ15274 297 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 TOMM34Q15785 309 aaPredicted RBP14.27□□□□□ -0.13
DDX54-204ENST00000546898 SYPL1Q16563 259 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 COX20Q5RI15 118 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 BLOC1S3Q6QNY0 202 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 CMIPQ8IY22 773 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 LILRA2Q8N149 483 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 ANKFN1Q8N957 763 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 TMEM234Q8WY98 164 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 GTF2H4Q92759 462 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 RBM24Q9BX46 236 aaKnown RBP14.27□□□□□ -0.13
DDX54-204ENST00000546898 PRRG4Q9BZD6 226 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 RAD21L1Q9H4I0 556 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 TMEM185BQ9H7F4 350 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
DDX54-204ENST00000546898 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.27□□□□□ -0.13
DDX54-204ENST00000546898 CALML5Q9NZT1 146 aa14.27□□□□□ -0.13
DDX54-204ENST00000546898 MPDZO75970 2070 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 A0A096LPI6 279 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 A0A0J9YW62 118 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 AGAP5A6NIR3 686 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 TNFSF11O14788 317 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 CXCL13O43927 109 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 CYP7B1O75881 506 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 SYNGR4O95473 234 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 CHRM4P08173 479 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 NR2F1P10589 423 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 IL11P20809 199 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 CRATP43155 626 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 PCYT1AP49585 367 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 DSTNP60981 165 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 KCNJ10P78508 379 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 GNA13Q14344 377 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 GUSBP1Q15486 140 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 HBMQ6B0K9 141 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 C3orf33Q6P1S2 294 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 LUZP2Q86TE4 346 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 FUNDC1Q8IVP5 155 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 ARFGAP2Q8N6H7 521 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 CNEP1R1Q8N9A8 125 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 WDR60Q8WVS4 1066 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 STARD4Q96DR4 205 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 SPDL1Q96EA4 605 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 THUMPD3Q9BV44 507 aaKnown RBP14.26□□□□□ -0.13
DDX54-204ENST00000546898 PAIP1Q9H074 479 aaKnown RBP14.26□□□□□ -0.13
DDX54-204ENST00000546898 RABEP2Q9H5N1 569 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 MTHFD2LQ9H903 347 aaPredicted RBP14.26□□□□□ -0.13
DDX54-204ENST00000546898 TIGARQ9NQ88 270 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 GLRX2Q9NS18 164 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 CCDC167Q9P0B6 97 aa14.26□□□□□ -0.13
DDX54-204ENST00000546898 TACC2O95359 2948 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 DSPPQ9NZW4 1301 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 TMEM247A6NEH6 219 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 A8MXE2 369 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 AQP8O94778 261 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 DBIP07108 87 aaKnown RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 PABPC4LP0CB38 370 aaKnown RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 CD8BP10966 210 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 ETFAP13804 333 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 HOXB9P17482 250 aaPredicted RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 RPS4Y1P22090 263 aaKnown RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 SFTPDP35247 375 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 KIR2DL2P43627 348 aaPredicted RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 SLC6A8P48029 635 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 CRISP3P54108 245 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 FADDQ13158 208 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 GTDC1Q4AE62 458 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 LRIF1Q5T3J3 769 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 PPP4R4Q6NUP7 873 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 VWA1Q6PCB0 445 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 SLC2A7Q6PXP3 512 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 FAM214BQ7L5A3 538 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 FAM222BQ8WU58 562 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 CPNE4Q96A23 557 aaPredicted RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 ZG16BQ96DA0 208 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 AURKBQ96GD4 344 aaPredicted RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 GMPPAQ96IJ6 420 aaPredicted RBP14.25□□□□□ -0.13
DDX54-204ENST00000546898 ACER3Q9NUN7 267 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 ZNF446Q9NWS9 450 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 GALNT8Q9NY28 637 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 TRIM33Q9UPN9 1127 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms