RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 USP43Q70EL4 1123 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 ASPGQ86U10 573 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 C7orf57Q8NEG2 295 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 OR7G3Q8NG95 312 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 OR52B6Q8NGF0 335 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 B4GALNT2Q8NHY0 566 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 NT5CQ8TCD5 201 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 SLC13A3Q8WWT9 602 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 MMABQ96EY8 250 aaPredicted RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 MAELQ96JY0 434 aaKnown RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 WFIKKN1Q96NZ8 548 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 SERPINI1Q99574 410 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 CPPED1Q9BRF8 314 aaPredicted RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 TUBB6Q9BUF5 446 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 RBM24Q9BX46 236 aaKnown RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 MMADHCQ9H3L0 296 aaPredicted RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 TRIM45Q9H8W5 580 aaPredicted RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 ZDHHC11Q9H8X9 412 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 UNKLQ9H9P5 680 aaKnown RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 SH2D2AQ9NP31 389 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 MRGBPQ9NV56 204 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 C14orf105Q9NVL8 296 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 ALKBH4Q9NXW9 302 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 GAR1Q9NY12 217 aaKnown RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 AHSPQ9NZD4 102 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 HCN3Q9P1Z3 774 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 SLC22A7Q9Y694 548 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 HEATR5BQ9P2D3 2071 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 SYNDIG1LA6NDD5 238 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 A6NLC8 198 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 PRSS47A8MTI9 375 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 EEF1E1-BLOC1S5C9J1V9 151 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 MANBAO00462 879 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 HS3ST1O14792 307 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 HDAC3O15379 428 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 EEF1E1O43324 174 aaKnown RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 RGS14O43566 566 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 PEX1O43933 1283 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 NDUFS7O75251 213 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 OR4F21O95013 312 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 IGHG3P01860 377 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 CCDC159P0C7I6 412 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 TROVE2P10155 538 aaKnown RBP eCLIP6.02□□□□□ -1.45
LDHA-223ENST00000545215 SLC25A16P16260 332 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 TIMP3P35625 211 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 GSTM5P46439 218 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 ZNF134P52741 427 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 CHN2P52757 468 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 SEC24CP53992 1094 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 DSCR9P59020 149 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 ROR2Q01974 943 aaKnown RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 PIGFQ07326 219 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 MAD2L1Q13257 205 aaPredicted RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 DYNC1I2Q13409 638 aaKnown RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 HERC3Q15034 1050 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 SMU1Q2TAY7 513 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 ADPRMQ3LIE5 342 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 SH2D4BQ5SQS7 431 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 KPRPQ5T749 579 aaPredicted RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 ZCCHC23Q6ZST2 131 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 PAGE2Q7Z2X7 111 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 FAM9CQ8IZT9 166 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 ZNF441Q8N8Z8 693 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 PCYOX1LQ8NBM8 494 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 PSD4Q8NDX1 1056 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 HUS1BQ8NHY5 278 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 WDR20Q8TBZ3 569 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 POC1BQ8TC44 478 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 ZNF473Q8WTR7 871 aaKnown RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 SELENOMQ8WWX9 145 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 ST8SIA2Q92186 375 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 NTNG2Q96CW9 530 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 TM4SF19Q96DZ7 209 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 TRIB1Q96RU8 372 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 TBCDQ9BTW9 1192 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 NSRP1Q9H0G5 558 aaKnown RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 SEC61A2Q9H9S3 476 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 MKKSQ9NPJ1 570 aaPredicted RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 VPS29Q9UBQ0 182 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 ZNF490Q9ULM2 529 aaPredicted RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 KLF13Q9Y2Y9 288 aaPredicted RBP6.02□□□□□ -1.45
LDHA-223ENST00000545215 TMED5Q9Y3A6 229 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 RNF11Q9Y3C5 154 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 KIAA1549Q9HCM3 1950 aa6.02□□□□□ -1.45
LDHA-223ENST00000545215 A0A0A6YYC8 382 aaPredicted RBP6.01□□□□□ -1.45
LDHA-223ENST00000545215 I3L1I5 382 aaPredicted RBP6.01□□□□□ -1.45
LDHA-223ENST00000545215 PPP6CO00743 305 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 NDUFS4O43181 175 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 DHHO43323 396 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 SSX4O60224 188 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 CDC14BO60729 498 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 EDF1O60869 148 aaKnown RBP6.01□□□□□ -1.45
LDHA-223ENST00000545215 GUCY1B2O75343 617 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 RSL1D1O76021 490 aaKnown RBP6.01□□□□□ -1.45
LDHA-223ENST00000545215 MYO1DO94832 1006 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 TGFAP01135 160 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 TK1P04183 234 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 CHRNGP07510 517 aa6.01□□□□□ -1.45
LDHA-223ENST00000545215 VIMP08670 466 aaKnown RBP6.01□□□□□ -1.45
LDHA-223ENST00000545215 PCNAP12004 261 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms