RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ZNF264O43296 627 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 RAB15P59190 212 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 EFNB1P98172 346 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 EMX1Q04741 257 aaPredicted RBP18.18■□□□□ 0.5
COPS7A-218ENST00000543939 DCAF12Q5T6F0 453 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CDCP2Q5VXM1 449 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 SLC27A4Q6P1M0 643 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 TMPRSS11FQ6ZWK6 438 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 GALNT6Q8NCL4 622 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 OR8K3Q8NH51 312 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 OSTF1Q92882 214 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CDC6Q99741 560 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 DPH1Q9BZG8 443 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 RTN4RQ9BZR6 473 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 AMBNQ9NP70 447 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 ATP13A2Q9NQ11 1180 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 TVP23BQ9NYZ1 205 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CDH10Q9Y6N8 788 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 LOC102723996A0A087X1L8 192 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 TRBV11-1A0A0K0K1C0 115 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CCDC160A6NGH7 325 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 PRR33A8MZF0 331 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 ALG1L2C9J202 215 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 GTPBP1O00178 669 aaKnown RBP18.18■□□□□ 0.5
COPS7A-218ENST00000543939 PCYT1AP49585 367 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 NCF4Q15080 339 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 ISXQ2M1V0 245 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 FAM69BQ5VUD6 431 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CBLN3Q6UW01 205 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 TCEANCQ8N8B7 351 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 OR13F1Q8NGS4 319 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 DNAJA4Q8WW22 397 aaPredicted RBP18.18■□□□□ 0.5
COPS7A-218ENST00000543939 FGF11Q92914 225 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 MUL1Q969V5 352 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 BPIFA2Q96DR5 249 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 COPS4Q9BT78 406 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 LAT2Q9GZY6 243 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CARD8Q9Y2G2 431 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CACNA1HO95180 2353 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 OR6C70A6NIJ9 312 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 TMEM200CA6NKL6 621 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 KPNA4O00629 521 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-218ENST00000543939 PRKYO43930 277 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 KLF7O75840 302 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-218ENST00000543939 SEC14L2O76054 403 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 UMODP07911 640 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 MASP1P48740 699 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 NRG3P56975 720 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 COPZ1P61923 177 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 OCLNQ16625 522 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 SLC25A30Q5SVS4 291 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 RAB11FIP2Q7L804 512 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 CDK20Q8IZL9 346 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 FAM26EQ8N5C1 309 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 FAR1Q8WVX9 515 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 MYDGFQ969H8 173 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 Q96MT0 163 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 TSSK6Q9BXA6 273 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 YIPF3Q9GZM5 350 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 LHPPQ9H008 270 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 TBC1D23Q9NUY8 699 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 SELENONQ9NZV5 590 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 NPFFR2Q9Y5X5 522 aa18.17■□□□□ 0.5
COPS7A-218ENST00000543939 C4orf47A7E2U8 309 aa18.16■□□□□ 0.5
COPS7A-218ENST00000543939 ENTPD6O75354 484 aa18.16■□□□□ 0.5
COPS7A-218ENST00000543939 TUBA3CQ13748 450 aa18.16■□□□□ 0.5
COPS7A-218ENST00000543939 C16orf47Q6ZP98 133 aaPredicted RBP18.16■□□□□ 0.5
COPS7A-218ENST00000543939 SVOPQ8N4V2 548 aa18.16■□□□□ 0.5
COPS7A-218ENST00000543939 OR4Q3Q8NH05 313 aa18.16■□□□□ 0.5
COPS7A-218ENST00000543939 BRIX1Q8TDN6 353 aaKnown RBP18.16■□□□□ 0.5
COPS7A-218ENST00000543939 C3orf49Q96BT1 292 aa18.16■□□□□ 0.5
COPS7A-218ENST00000543939 LIN37Q96GY3 246 aaPredicted RBP18.16■□□□□ 0.5
COPS7A-218ENST00000543939 GPR83Q9NYM4 423 aa18.16■□□□□ 0.5
COPS7A-218ENST00000543939 PTRH2Q9Y3E5 179 aaKnown RBP18.16■□□□□ 0.5
COPS7A-218ENST00000543939 A0A087WUJ7 227 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 FADS1O60427 444 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 ZNF354AO60765 605 aaPredicted RBP18.15■□□□□ 0.5
COPS7A-218ENST00000543939 PPM1BO75688 479 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 STK17BO94768 372 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 CDK1P06493 297 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 MAP2K4P45985 399 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 SLC15A1P46059 708 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 CLDN6P56747 220 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 PCOLCEQ15113 449 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 CLEC12AQ5QGZ9 265 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 WBP2NLQ6ICG8 309 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 MARCH3Q86UD3 253 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 OR5L2Q8NGL0 311 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 SAMD8Q96LT4 415 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 CCNL2Q96S94 520 aaPredicted RBP18.15■□□□□ 0.5
COPS7A-218ENST00000543939 ZPBPQ9BS86 351 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 CXorf56Q9H5V9 222 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 CNOT2Q9NZN8 540 aaKnown RBP18.15■□□□□ 0.5
COPS7A-218ENST00000543939 DNAJC27Q9NZQ0 273 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 RSL24D1Q9UHA3 163 aaKnown RBP18.15■□□□□ 0.5
COPS7A-218ENST00000543939 ICAM5Q9UMF0 924 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 PMS2P1A4D2B8 440 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 NDUFB5O43674 189 aa18.15■□□□□ 0.5
COPS7A-218ENST00000543939 TLX2O43763 284 aaPredicted RBP18.15■□□□□ 0.5
COPS7A-218ENST00000543939 EIF4E2O60573 245 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms