RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 EPS8Q12929 822 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 MRPL49Q13405 166 aaKnown RBP12.34□□□□□ -0.43
SP140-213ENST00000543928 ELOAQ14241 798 aaKnown RBP12.34□□□□□ -0.43
SP140-213ENST00000543928 QPRTQ15274 297 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 DUSP7Q16829 419 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 TMEM44Q2T9K0 475 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 SPATS1Q496A3 300 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 GLYR1Q49A26 553 aaPredicted RBP12.34□□□□□ -0.43
SP140-213ENST00000543928 ATCAYQ86WG3 371 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 CHERPQ8IWX8 916 aaKnown RBP12.34□□□□□ -0.43
SP140-213ENST00000543928 ZBTB8AQ96BR9 441 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 ZNF524Q96C55 264 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
SP140-213ENST00000543928 NPAS1Q99742 590 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 KLHL28Q9NXS3 571 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.34□□□□□ -0.43
SP140-213ENST00000543928 SLC13A4Q9UKG4 626 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 PRPF19Q9UMS4 504 aaKnown RBP12.34□□□□□ -0.43
SP140-213ENST00000543928 GTF3C1Q12789 2109 aa12.34□□□□□ -0.43
SP140-213ENST00000543928 OR2M5A3KFT3 312 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 OR14I1A6ND48 311 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 NPIPA2E9PIF3 369 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 NPIPA3F8WFD2 350 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 UQCRBP14927 111 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ABOP16442 354 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ZNF17P17021 662 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 PRKCAP17252 672 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 BMP7P18075 431 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 PTGS2P35354 604 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 MSX2P35548 267 aaPredicted RBP12.33□□□□□ -0.44
SP140-213ENST00000543928 ACAA2P42765 397 aaKnown RBP12.33□□□□□ -0.44
SP140-213ENST00000543928 GFRA1P56159 465 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 RBPJQ06330 500 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 FOXF1Q12946 379 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 CYBRD1Q53TN4 286 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 NHSL2Q5HYW2 709 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 GLYATQ6IB77 296 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 AAGABQ6PD74 315 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ZNF550Q7Z398 422 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ARHGAP24Q8N264 748 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 GTPBP8Q8N3Z3 284 aaPredicted RBP12.33□□□□□ -0.44
SP140-213ENST00000543928 GPR32P1Q8NGA4 272 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ZNF563Q8TA94 476 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 POC1BQ8TC44 478 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 RASSF5Q8WWW0 418 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ST8SIA1Q92185 356 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ABTB1Q969K4 478 aaPredicted RBP12.33□□□□□ -0.44
SP140-213ENST00000543928 SLC35B4Q969S0 331 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 FAM162AQ96A26 154 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 SARAFQ96BY9 339 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 RNF145Q96MT1 663 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 PIGQQ9BRB3 760 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 BTBD10Q9BSF8 475 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 UGT2B28Q9BY64 529 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 ACAD8Q9UKU7 415 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 POLEQ07864 2286 aa12.33□□□□□ -0.44
SP140-213ENST00000543928 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 C7orf72A4D263 438 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 SYT5O00445 386 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 FAAHO00519 579 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 EBAG9O00559 213 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 SLC19A2O60779 497 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 GMNNO75496 209 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 ATP5HO75947 161 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 PDE5AO76074 875 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 WISP1O95388 367 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 LGI1O95970 557 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 ACTL6AO96019 429 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 FESP07332 822 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 C8BP07358 591 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 GP1BBP13224 206 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 GNLYP22749 145 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 CHMP24386 653 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 PSMA4P25789 261 aaKnown RBP12.32□□□□□ -0.44
SP140-213ENST00000543928 EIF1P41567 113 aaKnown RBP12.32□□□□□ -0.44
SP140-213ENST00000543928 UQCRFS1P47985 274 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 IDH2P48735 452 aaKnown RBP12.32□□□□□ -0.44
SP140-213ENST00000543928 STARP49675 285 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 RGS8P57771 180 aaPredicted RBP12.32□□□□□ -0.44
SP140-213ENST00000543928 SESN3P58005 492 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 HOXC5Q00444 222 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 CRYZQ08257 329 aaKnown RBP12.32□□□□□ -0.44
SP140-213ENST00000543928 FXNQ16595 210 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 DCST1Q5T197 706 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 VASNQ6EMK4 673 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 TMEM234Q8WY98 164 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 PROX1Q92786 737 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 CLPTM1LQ96KA5 538 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 MRGPRX4Q96LA9 322 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 TIMP4Q99727 224 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 WFDC6Q9BQY6 131 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 THTPAQ9BU02 230 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 PCDHAC1Q9H158 963 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 ACER3Q9NUN7 267 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 BAG5Q9UL15 447 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 ZNF337Q9Y3M9 751 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 SNX13Q9Y5W8 968 aa12.32□□□□□ -0.44
SP140-213ENST00000543928 ESPL1Q14674 2120 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms