RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 KLHL21Q9UJP4 597 aa12.49□□□□□ -0.41
PPME1-208ENST00000543525 SIGLEC7Q9Y286 467 aa12.49□□□□□ -0.41
PPME1-208ENST00000543525 SLC35A3Q9Y2D2 325 aa12.49□□□□□ -0.41
PPME1-208ENST00000543525 ENTPD2Q9Y5L3 495 aa12.49□□□□□ -0.41
PPME1-208ENST00000543525 SIRT4Q9Y6E7 314 aaPredicted RBP12.49□□□□□ -0.41
PPME1-208ENST00000543525 A0A0B4J293 547 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 C2orf74A8MZ97 194 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 CENPBD1B2RD01 187 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 H0Y8X5 98 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 BRINP1O60477 761 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 REM1O75628 298 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 SOX30O94993 753 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 CHRNB1P11230 501 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 ZNF3P17036 446 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 HK1P19367 917 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 ELK1P19419 428 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 HNRNPA2B1P22626 353 aaKnown RBP12.48□□□□□ -0.41
PPME1-208ENST00000543525 TALDO1P37837 337 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 SLC16A1P53985 500 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 SRP54P61011 504 aaKnown RBP12.48□□□□□ -0.41
PPME1-208ENST00000543525 SHC2P98077 582 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 CSTF1Q05048 431 aaKnown RBP12.48□□□□□ -0.41
PPME1-208ENST00000543525 GPR18Q14330 331 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 TATDN3Q17R31 274 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 PRICKLE4Q2TBC4 344 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 ZNF57Q68EA5 555 aaPredicted RBP12.48□□□□□ -0.41
PPME1-208ENST00000543525 ANKRD54Q6NXT1 300 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 SYCE2Q6PIF2 218 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 ARL9Q6T311 187 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 LRRC28Q86X40 367 aaPredicted RBP12.48□□□□□ -0.41
PPME1-208ENST00000543525 TMEFF1Q8IYR6 380 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 TCTE3Q8IZS6 198 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 SLC43A2Q8N370 569 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 OR5M3Q8NGP4 307 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 SLC2A12Q8TD20 617 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 RNF31Q96EP0 1072 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 KCNJ15Q99712 375 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 HCAR1Q9BXC0 346 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 OR51V1Q9H2C8 321 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 MRPS2Q9Y399 296 aaKnown RBP12.48□□□□□ -0.41
PPME1-208ENST00000543525 ALG5Q9Y673 324 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 SCN3AQ9NY46 2000 aa12.48□□□□□ -0.41
PPME1-208ENST00000543525 GXYLT2A0PJZ3 443 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 CYR61O00622 381 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 PLPP2O43688 288 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 ORC5O43913 435 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 PTP4A3O75365 173 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 SLC43A1O75387 559 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 IFNGP01579 166 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 DRD5P21918 477 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 ALAS2P22557 587 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 MAP3K8P41279 467 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 ACTC1P68032 377 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 ACTA1P68133 377 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 CD83Q01151 205 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 MGAT2Q10469 447 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 POU4F2Q12837 409 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 EXOSC7Q15024 291 aaKnown RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 TIGD3Q6B0B8 471 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 THSD4Q6ZMP0 1018 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 RNF44Q7L0R7 432 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 TRILQ7L0X0 811 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 CA13Q8N1Q1 262 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 LILRB4Q8NHJ6 448 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 BAHD1Q8TBE0 780 aaPredicted RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 FAM3CQ92520 227 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 PTP4A1Q93096 173 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 TIMP4Q99727 224 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 TMEM246Q9BRR3 403 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 HDHD2Q9H0R4 259 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 CYSLTR2Q9NS75 346 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 NLKQ9UBE8 527 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 ATG2AQ2TAZ0 1938 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 A0A0J9YY10 115 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 FAM221BA6H8Z2 402 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 RFXAPO00287 272 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 CHP2O43745 196 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 GALR3O60755 368 aaPredicted RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 NKX2-2O95096 273 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 SBK2P0C263 348 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 FAM157BP0CG42 384 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 SHC1P29353 583 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 SLC6A6P31641 620 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 RBM34P42696 430 aaKnown RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 YPEL5P62699 121 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 TMEM52Q8NDY8 209 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 NLGN4YQ8NFZ3 816 aaPredicted RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 ABHD4Q8TB40 342 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 GRHL3Q8TE85 626 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 SMPDL3BQ92485 455 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 FYTTD1Q96QD9 318 aaKnown RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 MARVELD1Q9BSK0 173 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 ENAMQ9NRM1 1142 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 PAQR5Q9NXK6 330 aaPredicted RBP12.47□□□□□ -0.41
PPME1-208ENST00000543525 HAO2Q9NYQ3 351 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 CLCA3PQ9Y6N3 262 aa12.47□□□□□ -0.41
PPME1-208ENST00000543525 A0A0B4J2E0 115 aa12.46□□□□□ -0.42
PPME1-208ENST00000543525 A0A1B0GX12 115 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms