RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 TK1P04183 234 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 SNCAP37840 140 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 HLCSP50747 726 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 TAS2R46P59540 309 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 UBE2G2P60604 165 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 SQSTM1Q13501 440 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 TSSK4Q6SA08 328 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 STT3BQ8TCJ2 826 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 DEDD2Q8WXF8 326 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 RBMXL1Q96E39 390 aaKnown RBP10.1□□□□□ -0.79
GABRB3-204ENST00000541819 CMSS1Q9BQ75 279 aaKnown RBP10.1□□□□□ -0.79
GABRB3-204ENST00000541819 PITHD1Q9GZP4 211 aaPredicted RBP10.1□□□□□ -0.79
GABRB3-204ENST00000541819 EGLN3Q9H6Z9 239 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 SPO11Q9Y5K1 396 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 WIF1Q9Y5W5 379 aa10.1□□□□□ -0.79
GABRB3-204ENST00000541819 SNAI1O95863 264 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ITGB2P05107 769 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 HMGCLP35914 325 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 AFF3P51826 1226 aaKnown RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 MPPED2Q15777 294 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 SLC22A6Q4U2R8 563 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 SLC16A14Q7RTX9 510 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 MCATQ8IVS2 390 aaKnown RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ANKRD9Q96BM1 317 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 TCTN2Q96GX1 697 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 TMEM59Q9BXS4 323 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 H7C1Q1 480 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 M0R3H8 397 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 LAMP1P11279 417 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 LBX1P52954 281 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 DCAF12Q5T6F0 453 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 CREB3L2Q70SY1 520 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 FAM217AQ8IXS0 508 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 GLIS1Q8NBF1 620 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 TRUB1Q8WWH5 349 aaKnown RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 OCSTAMPQ9BR26 566 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 CENPOQ9BU64 300 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 CBLCQ9ULV8 474 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 LHX6Q9UPM6 363 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 NFKBIEO00221 500 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 SURF4O15260 269 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 LCMT2O60294 686 aaKnown RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 SLC35E2BP0CK96 405 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 HTR5AP47898 357 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ERVK-25P63136 954 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 WBP2NLQ6ICG8 309 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 OR6F1Q8NGZ6 308 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ASB17Q8WXJ9 295 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 NT5C3BQ969T7 300 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 COQ10AQ96MF6 247 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ZDHHC7Q9NXF8 308 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 SLC22A7Q9Y694 548 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 TSPAN11A1L157 253 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 PRAMEF27A3QJZ7 478 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 CDC14CA4D256 554 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 MEIS3P1A6NDR6 274 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ARAFP10398 606 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 CTSAP10619 480 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 IL13RA1P78552 427 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 OR8B8Q15620 311 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 C18orf21Q32NC0 220 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 KHDC1LQ5JSQ8 128 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 PRAMEF9Q5VWM5 478 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ZNF585AQ6P3V2 769 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 OR1J4Q8NGS1 313 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 CDS1Q92903 461 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 APIPQ96GX9 242 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 BOD1Q96IK1 185 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 THSD1Q9NS62 852 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 OLAHQ9NV23 265 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 MARCH4Q9P2E8 410 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 BTNL2Q9UIR0 455 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 NUDT7P0C024 238 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 BCKDHBP21953 392 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 RPL35P42766 123 aaKnown RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 KIR2DL3P43628 341 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 RAB11AP62491 216 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 MMP21Q8N119 569 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 CYB561A3Q8NBI2 242 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ZBTB8AQ96BR9 441 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 L3HYPDHQ96EM0 354 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 TOE1Q96GM8 510 aaKnown RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 UTP23Q9BRU9 249 aaKnown RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 ULBP3Q9BZM4 244 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 SLC19A3Q9BZV2 496 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 FAM234AQ9H0X4 552 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 DMRT3Q9NQL9 472 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 EHFQ9NZC4 300 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 C5AR2Q9P296 337 aa10.09□□□□□ -0.79
GABRB3-204ENST00000541819 COL3A1P02461 1466 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-204ENST00000541819 SLC9B1P1A6NJY1 282 aa10.08□□□□□ -0.8
GABRB3-204ENST00000541819 RNASET2O00584 256 aaKnown RBP10.08□□□□□ -0.8
GABRB3-204ENST00000541819 ARPC1BO15143 372 aaKnown RBP10.08□□□□□ -0.8
GABRB3-204ENST00000541819 DPM1O60762 260 aa10.08□□□□□ -0.8
GABRB3-204ENST00000541819 PTTG1O95997 202 aa10.08□□□□□ -0.8
GABRB3-204ENST00000541819 PCGF2P35227 344 aa10.08□□□□□ -0.8
GABRB3-204ENST00000541819 DCAF7P61962 342 aa10.08□□□□□ -0.8
GABRB3-204ENST00000541819 ZXDBP98169 803 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms