RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TM9SF3Q9HD45 589 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 DUS2Q9NX74 493 aaKnown RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 EHFQ9NZC4 300 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 GHRLQ9UBU3 117 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 LCMT1Q9UIC8 334 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 KIAA1257Q9ULG3 409 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 C15orf41Q9Y2V0 281 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 L3MBTL1Q9Y468 752 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 AP1M2Q9Y6Q5 423 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 CDC42BPBQ9Y5S2 1711 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 FAM135AQ9P2D6 1515 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 TTC21BQ7Z4L5 1316 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 KDM5CP41229 1560 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 ATP10AO60312 1499 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 GAPVD1Q14C86 1478 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 PLEKHH1Q9ULM0 1364 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 PINLYPA6NC86 204 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 K7EPI3 171 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 L7N2F9 121 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 SULT1B1O43704 296 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 SLC35G4P0C7Q5 338 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 POLR2MP0CAP2 368 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 NR2C1P13056 603 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 MAPK3P27361 379 aaPredicted RBP3.93□□□□□ -1.78
YBX3-210ENST00000540975 GDI1P31150 447 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 EVI2BP34910 448 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 RFC4P35249 363 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 GPC3P51654 580 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 SRYQ05066 204 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 BCL2L1Q07817 233 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 GNA13Q14344 377 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 KCNJ11Q14654 390 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 CCDC40Q4G0X9 1142 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 CCDC36Q8IYA8 594 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 DENND6BQ8NEG7 585 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 LILRB4Q8NHJ6 448 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 ART4Q93070 314 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 NCLNQ969V3 563 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 SGK3Q96BR1 496 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 CCDC43Q96MW1 224 aaKnown RBP3.93□□□□□ -1.78
YBX3-210ENST00000540975 ZNF184Q99676 751 aaPredicted RBP3.93□□□□□ -1.78
YBX3-210ENST00000540975 ACAT2Q9BWD1 397 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 SPZ1Q9BXG8 430 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 CCSER1Q9C0I3 900 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 SIRPDQ9H106 197 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 SDHAF3Q9NRP4 125 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 EMC3Q9P0I2 261 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 FETUBQ9UGM5 382 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 MOSPD1Q9UJG1 213 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 EXOSC1Q9Y3B2 195 aaKnown RBP3.93□□□□□ -1.78
YBX3-210ENST00000540975 ATP6V1DQ9Y5K8 247 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 TTC41PQ6P2S7 1318 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 WDR19Q8NEZ3 1342 aa3.93□□□□□ -1.78
YBX3-210ENST00000540975 PLB1Q6P1J6 1458 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 KIF14Q15058 1648 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 PRDM15P57071 1507 aaPredicted RBP3.92□□□□□ -1.78
YBX3-210ENST00000540975 RGSL1A5PLK6 1076 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 KRT87PA6NCN2 255 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 GOLGA6L10A6NI86 522 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 LRRIQ4A6NIV6 560 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 E9PLD3 99 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 MAGEB3O15480 346 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 CYTH3O43739 400 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 SPOPO43791 374 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 OR5F1O95221 314 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 S100A9P06702 114 aaKnown RBP3.92□□□□□ -1.78
YBX3-210ENST00000540975 HEXBP07686 556 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 IDO1P14902 403 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 ZNF17P17021 662 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 IL10P22301 178 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 NUMBP49757 651 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 HNMTP50135 292 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 UCNP55089 124 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 YBEYP58557 167 aaPredicted RBP3.92□□□□□ -1.78
YBX3-210ENST00000540975 MRPS6P82932 125 aaKnown RBP3.92□□□□□ -1.78
YBX3-210ENST00000540975 ZP4Q12836 540 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 OR2B11Q5JQS5 317 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 TMEM53Q6P2H8 277 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 OLFM4Q6UX06 510 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 NET1Q7Z628 596 aaPredicted RBP3.92□□□□□ -1.78
YBX3-210ENST00000540975 TMEM179BQ7Z7N9 219 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 CD302Q8IX05 232 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 OR10H4Q8NGA5 316 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 SLC22A8Q8TCC7 542 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 MARC2Q969Z3 335 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 TUBGCP3Q96CW5 907 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 DTNBP1Q96EV8 351 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 GCOM2Q9BZD3 368 aaPredicted RBP3.92□□□□□ -1.78
YBX3-210ENST00000540975 UPF3BQ9BZI7 483 aaKnown RBP3.92□□□□□ -1.78
YBX3-210ENST00000540975 TRIM4Q9C037 500 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 ZNF221Q9UK13 617 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 PTPRKQ15262 1439 aa3.92□□□□□ -1.78
YBX3-210ENST00000540975 ABCC2Q92887 1545 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 DISP1Q96F81 1524 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 IQANK1A0A1B0GTG1 560 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 FBLL1A6NHQ2 334 aaKnown RBP3.91□□□□□ -1.78
YBX3-210ENST00000540975 TM9SF1O15321 606 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 PRPSAP2O60256 369 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 KERAO60938 352 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 PTPRGP23470 1445 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms