RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 FOXK2Q01167 660 aa8.8□□□□□ -1
LCOR-209ENST00000540664 CDC20Q12834 499 aa8.8□□□□□ -1
LCOR-209ENST00000540664 MEPCEQ7L2J0 689 aaKnown RBP8.8□□□□□ -1
LCOR-209ENST00000540664 LSRQ86X29 649 aaPredicted RBP8.8□□□□□ -1
LCOR-209ENST00000540664 SIRT6Q8N6T7 355 aa8.8□□□□□ -1
LCOR-209ENST00000540664 OR7G1Q8NGA0 311 aa8.8□□□□□ -1
LCOR-209ENST00000540664 GRHL3Q8TE85 626 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PTCHD1Q96NR3 888 aa8.8□□□□□ -1
LCOR-209ENST00000540664 GUCD1Q96NT3 240 aa8.8□□□□□ -1
LCOR-209ENST00000540664 TIMP4Q99727 224 aa8.8□□□□□ -1
LCOR-209ENST00000540664 MIR1-1HGQ9H1L0 117 aa8.8□□□□□ -1
LCOR-209ENST00000540664 SP140LQ9H930 580 aa8.8□□□□□ -1
LCOR-209ENST00000540664 TBC1D17Q9HA65 648 aa8.8□□□□□ -1
LCOR-209ENST00000540664 CAPN10Q9HC96 672 aa8.8□□□□□ -1
LCOR-209ENST00000540664 SMURF1Q9HCE7 757 aa8.8□□□□□ -1
LCOR-209ENST00000540664 SOHLH2Q9NX45 425 aa8.8□□□□□ -1
LCOR-209ENST00000540664 BAIAP2Q9UQB8 552 aa8.8□□□□□ -1
LCOR-209ENST00000540664 ERVK-19Q9WJR5 959 aa8.8□□□□□ -1
LCOR-209ENST00000540664 TRAPPC4Q9Y296 219 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PCDH15Q96QU1 1955 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PNMA8CA0A1B0GUJ8 204 aa8.8□□□□□ -1
LCOR-209ENST00000540664 TRDV1A0A1B0GX56 115 aa8.8□□□□□ -1
LCOR-209ENST00000540664 SERINC4A6NH21 518 aa8.8□□□□□ -1
LCOR-209ENST00000540664 SLC2A5P22732 501 aa8.8□□□□□ -1
LCOR-209ENST00000540664 RANBP1P43487 201 aa8.8□□□□□ -1
LCOR-209ENST00000540664 RFX3P48380 749 aa8.8□□□□□ -1
LCOR-209ENST00000540664 COPZ1P61923 177 aa8.8□□□□□ -1
LCOR-209ENST00000540664 BDH1Q02338 343 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PRPF38BQ5VTL8 546 aaKnown RBP8.8□□□□□ -1
LCOR-209ENST00000540664 NKAIN2Q5VXU1 208 aa8.8□□□□□ -1
LCOR-209ENST00000540664 STEAP3Q658P3 488 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PLBD1Q6P4A8 553 aa8.8□□□□□ -1
LCOR-209ENST00000540664 ULK3Q6PHR2 472 aa8.8□□□□□ -1
LCOR-209ENST00000540664 LHFPL3Q86UP9 236 aa8.8□□□□□ -1
LCOR-209ENST00000540664 KLHL36Q8N4N3 616 aa8.8□□□□□ -1
LCOR-209ENST00000540664 ARIH2OSQ8N7S6 290 aa8.8□□□□□ -1
LCOR-209ENST00000540664 FAM71CQ8NEG0 241 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PTP4A1Q93096 173 aa8.8□□□□□ -1
LCOR-209ENST00000540664 CLDN23Q96B33 292 aa8.8□□□□□ -1
LCOR-209ENST00000540664 ARSGQ96EG1 525 aa8.8□□□□□ -1
LCOR-209ENST00000540664 MVB12AQ96EY5 273 aa8.8□□□□□ -1
LCOR-209ENST00000540664 SDHCQ99643 169 aaPredicted RBP8.8□□□□□ -1
LCOR-209ENST00000540664 HCAR1Q9BXC0 346 aa8.8□□□□□ -1
LCOR-209ENST00000540664 H2AFY2Q9P0M6 372 aaPredicted RBP8.8□□□□□ -1
LCOR-209ENST00000540664 LRIT1Q9P2V4 623 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PRODH2Q9UF12 536 aa8.8□□□□□ -1
LCOR-209ENST00000540664 ICAM5Q9UMF0 924 aa8.8□□□□□ -1
LCOR-209ENST00000540664 YARS2Q9Y2Z4 477 aaKnown RBP8.8□□□□□ -1
LCOR-209ENST00000540664 MMACHCQ9Y4U1 282 aa8.8□□□□□ -1
LCOR-209ENST00000540664 PCDHGB6Q9Y5F9 930 aa8.8□□□□□ -1
LCOR-209ENST00000540664 EML5Q05BV3 1969 aa8.79□□□□□ -1
LCOR-209ENST00000540664 COL5A1P20908 1838 aaPredicted RBP8.79□□□□□ -1
LCOR-209ENST00000540664 IGHV1OR21-1A0A087WYE8 117 aa8.79□□□□□ -1
LCOR-209ENST00000540664 IGKV3D-11A0A0A0MRZ8 115 aa8.79□□□□□ -1
LCOR-209ENST00000540664 FAM86C2PA6NEL3 165 aa8.79□□□□□ -1
LCOR-209ENST00000540664 CCDC182A6NF36 153 aa8.79□□□□□ -1
LCOR-209ENST00000540664 FAM183AA6NL82 134 aa8.79□□□□□ -1
LCOR-209ENST00000540664 RHPN2P1A8MT19 583 aa8.79□□□□□ -1
LCOR-209ENST00000540664 LOC110117498-PIK3R3F6TDL0 507 aa8.79□□□□□ -1
LCOR-209ENST00000540664 SLC30A4O14863 429 aa8.79□□□□□ -1
LCOR-209ENST00000540664 NUDT21O43809 227 aaKnown RBP8.79□□□□□ -1
LCOR-209ENST00000540664 TNFSF8P32971 234 aa8.79□□□□□ -1
LCOR-209ENST00000540664 ADH7P40394 386 aa8.79□□□□□ -1
LCOR-209ENST00000540664 CFHR1Q03591 330 aa8.79□□□□□ -1
LCOR-209ENST00000540664 ZP2Q05996 745 aa8.79□□□□□ -1
LCOR-209ENST00000540664 KLHL26Q53HC5 615 aa8.79□□□□□ -1
LCOR-209ENST00000540664 ALG10BQ5I7T1 473 aa8.79□□□□□ -1
LCOR-209ENST00000540664 FNDC7Q5VTL7 733 aa8.79□□□□□ -1
LCOR-209ENST00000540664 VASNQ6EMK4 673 aa8.79□□□□□ -1
LCOR-209ENST00000540664 ZNF322Q6U7Q0 402 aaPredicted RBP8.79□□□□□ -1
LCOR-209ENST00000540664 KIRREL2Q6UWL6 708 aa8.79□□□□□ -1
LCOR-209ENST00000540664 METTL27Q8N6F8 245 aaPredicted RBP8.79□□□□□ -1
LCOR-209ENST00000540664 ZNF614Q8N883 585 aa8.79□□□□□ -1
LCOR-209ENST00000540664 PTPMT1Q8WUK0 201 aaPredicted RBP8.79□□□□□ -1
LCOR-209ENST00000540664 SNRNP27Q8WVK2 155 aaKnown RBP8.79□□□□□ -1
LCOR-209ENST00000540664 OR1F2PQ96R84 312 aa8.79□□□□□ -1
LCOR-209ENST00000540664 SECISBP2Q96T21 854 aaKnown RBP8.79□□□□□ -1
LCOR-209ENST00000540664 COQ7Q99807 217 aa8.79□□□□□ -1
LCOR-209ENST00000540664 KCNS3Q9BQ31 491 aa8.79□□□□□ -1
LCOR-209ENST00000540664 NEURL2Q9BR09 285 aa8.79□□□□□ -1
LCOR-209ENST00000540664 MCCC2Q9HCC0 563 aa8.79□□□□□ -1
LCOR-209ENST00000540664 SNTG1Q9NSN8 517 aa8.79□□□□□ -1
LCOR-209ENST00000540664 CUTCQ9NTM9 273 aa8.79□□□□□ -1
LCOR-209ENST00000540664 TNFRSF10DQ9UBN6 386 aa8.79□□□□□ -1
LCOR-209ENST00000540664 SERTAD3Q9UJW9 196 aa8.79□□□□□ -1
LCOR-209ENST00000540664 SLC35A3Q9Y2D2 325 aa8.79□□□□□ -1
LCOR-209ENST00000540664 CAB39Q9Y376 341 aaPredicted RBP8.79□□□□□ -1
LCOR-209ENST00000540664 NUP210LQ5VU65 1888 aa8.79□□□□□ -1
LCOR-209ENST00000540664 TRAV27A0A087WT01 109 aa8.78□□□□□ -1
LCOR-209ENST00000540664 TBX1O43435 398 aa8.78□□□□□ -1
LCOR-209ENST00000540664 AKAP8O43823 692 aaKnown RBP8.78□□□□□ -1
LCOR-209ENST00000540664 SDC3O75056 442 aa8.78□□□□□ -1
LCOR-209ENST00000540664 CDRT1O95170 752 aa8.78□□□□□ -1
LCOR-209ENST00000540664 GIMD1P0DJR0 217 aa8.78□□□□□ -1
LCOR-209ENST00000540664 SAGP10523 405 aaPredicted RBP8.78□□□□□ -1
LCOR-209ENST00000540664 BCKDHBP21953 392 aa8.78□□□□□ -1
LCOR-209ENST00000540664 GALP22466 123 aa8.78□□□□□ -1
LCOR-209ENST00000540664 CSNK1EP49674 416 aaKnown RBP8.78□□□□□ -1
LCOR-209ENST00000540664 RGS19P49795 217 aa8.78□□□□□ -1
LCOR-209ENST00000540664 PGDP52209 483 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms