RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 PCDHGA3Q9Y5H0 932 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 SCDO00767 359 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 ARHGAP33O14559 1287 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 SCG5P05408 212 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 ZGLP1P0C6A0 271 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 ANKRD34CP0C6C1 535 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 TGFBR1P36897 503 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 GPR143P51810 404 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 BMXP51813 675 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 DCAF7P61962 342 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 CCL7P80098 99 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 SQSTM1Q13501 440 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 NDUFAF6Q330K2 333 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 KLHL26Q53HC5 615 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 SMARCD3Q6STE5 483 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 KIRREL2Q6UWL6 708 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 ZNF721Q8TF20 911 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 OTULINQ96BN8 352 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 LMF1Q96S06 567 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 IFT27Q9BW83 186 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 NXF5Q9H1B4 397 aaKnown RBP13.68□□□□□ -0.22
TSFM-207ENST00000540550 MEPEQ9NQ76 525 aaPredicted RBP13.68□□□□□ -0.22
TSFM-207ENST00000540550 OSGIN1Q9UJX0 560 aa13.68□□□□□ -0.22
TSFM-207ENST00000540550 C2orf92A0A1B0GVN3 265 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 FAM86C2PA6NEL3 165 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 PRKNO60260 465 aaPredicted RBP13.67□□□□□ -0.22
TSFM-207ENST00000540550 ADAM11O75078 769 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 IGKV3-11P04433 115 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 ETV5P41161 510 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 ETV1P50549 477 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 SIGLEC14Q08ET2 396 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 AADACL4Q5VUY2 407 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 NXNL2Q5VZ03 156 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
TSFM-207ENST00000540550 LINC00299Q6ZSB3 139 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 CXXC5Q7LFL8 322 aaKnown RBP13.67□□□□□ -0.22
TSFM-207ENST00000540550 RABEPKQ7Z6M1 372 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 GID4Q8IVV7 300 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 DNAJA4Q8WW22 397 aaPredicted RBP13.67□□□□□ -0.22
TSFM-207ENST00000540550 NAT6Q93015 286 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 NUDT9Q9BW91 350 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 TAPBPLQ9BX59 468 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 VN1R1Q9GZP7 353 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 GAREM1Q9H706 876 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 FER1L5A0AVI2 2057 aa13.67□□□□□ -0.22
TSFM-207ENST00000540550 LY6G6EA0A0G2JKS1 128 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 A0A1B0GVG6 124 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 APOL3O95236 402 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 UTS2O95399 124 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 UBL4AP11441 157 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 TBXA2RP21731 343 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 OPRL1P41146 370 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 SOX3P41225 446 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 CRYZQ08257 329 aaKnown RBP13.66□□□□□ -0.22
TSFM-207ENST00000540550 MLLT11Q13015 90 aaPredicted RBP13.66□□□□□ -0.22
TSFM-207ENST00000540550 ZNF846Q147U1 533 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 SSX1Q16384 188 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 C16orf87Q6PH81 154 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 PAQR6Q6TCH4 344 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 TMPRSS9Q7Z410 1059 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 SLC15A4Q8N697 577 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 EID2Q8N6I1 236 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 FAM181AQ8N9Y4 354 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 GATSQ8NAP1 163 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 ZSCAN1Q8NBB4 408 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 OR4D9Q8NGE8 314 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 S100ZQ8WXG8 99 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 VMP1Q96GC9 406 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 PHOX2BQ99453 314 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 ZNF426Q9BUY5 554 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 HMG20AQ9NP66 347 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 SIGLEC7Q9Y286 467 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 CARD8Q9Y2G2 431 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 U3KQA8 63 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 TRAV27A0A087WT01 109 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 GTPBP1O00178 669 aaKnown RBP13.66□□□□□ -0.22
TSFM-207ENST00000540550 BHLHE40O14503 412 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 GNB5O14775 395 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 SLC2A10O95528 541 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 IL12BP29460 328 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 HTR1FP30939 366 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 ATP6V1E1P36543 226 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 GAS1P54826 345 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 WNT4P56705 351 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 FXYD6P3P58550 94 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 RHBDD2Q6NTF9 364 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 C19orf48Q6RUI8 117 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 SLC29A4Q7RTT9 530 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 OAFQ86UD1 273 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 ATCAYQ86WG3 371 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 LSRQ86X29 649 aaPredicted RBP13.66□□□□□ -0.22
TSFM-207ENST00000540550 CPOQ8IVL8 374 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 LNX2Q8N448 690 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 TMCO5AQ8N6Q1 288 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 AMER2Q8N7J2 671 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 OR51A7Q8NH64 312 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 PHOSPHO1Q8TCT1 267 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 SH3YL1Q96HL8 342 aaPredicted RBP13.66□□□□□ -0.22
TSFM-207ENST00000540550 OR6C1Q96RD1 312 aa13.66□□□□□ -0.22
TSFM-207ENST00000540550 WDR12Q9GZL7 423 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms