RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 TOR1AIP2Q8NFQ8 470 aa11.44□□□□□ -0.58
USP10-202ENST00000540269 HOXB13Q92826 284 aaPredicted RBP11.44□□□□□ -0.58
USP10-202ENST00000540269 DIRAS2Q96HU8 199 aa11.44□□□□□ -0.58
USP10-202ENST00000540269 TNFRSF13CQ96RJ3 184 aa11.44□□□□□ -0.58
USP10-202ENST00000540269 C8orf33Q9H7E9 229 aaPredicted RBP11.44□□□□□ -0.58
USP10-202ENST00000540269 CACYBPQ9HB71 228 aaKnown RBP11.44□□□□□ -0.58
USP10-202ENST00000540269 FOLH1BQ9HBA9 442 aa11.44□□□□□ -0.58
USP10-202ENST00000540269 SPACA6W5XKT8 324 aa11.44□□□□□ -0.58
USP10-202ENST00000540269 HEATR5AQ86XA9 2040 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 A0A0B4J2E0 115 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 A0A1B0GX12 115 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 OR10H2O60403 315 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 PTP4A3O75365 173 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 HMGN1P05114 100 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 SLC35E2P0CK97 266 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 SAGP10523 405 aaPredicted RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 DRD5P21918 477 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 APEX1P27695 318 aaKnown RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 AMZ1Q400G9 498 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 FAM27D1Q5T7N8 215 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 OOSP2Q86WS3 158 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 MCATQ8IVS2 390 aaKnown RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 UBE2J2Q8N2K1 259 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 RFLNBQ8N5W9 214 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 LMF1Q96S06 567 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 MAP3K3Q99759 626 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 MED18Q9BUE0 208 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 IFT27Q9BW83 186 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 TPSD1Q9BZJ3 242 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 IRF2BPLQ9H1B7 796 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 OR51V1Q9H2C8 321 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 DNAJB12Q9NXW2 375 aaKnown RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 PPP1R3DO95685 299 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 WNT1P04628 370 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 CTSEP14091 401 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 CRMP1Q14194 572 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 P2RY14Q15391 338 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 PRPF38BQ5VTL8 546 aaKnown RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 TMPRSS11FQ6ZWK6 438 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 MEPCEQ7L2J0 689 aaKnown RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 Q8N9G6 341 aaPredicted RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 C19orf47Q8N9M1 422 aaKnown RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 ATP6V1C2Q8NEY4 427 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 MMP28Q9H239 520 aa11.43□□□□□ -0.58
USP10-202ENST00000540269 CCDC86Q9H6F5 360 aaKnown RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 H2AFY2Q9P0M6 372 aaPredicted RBP11.43□□□□□ -0.58
USP10-202ENST00000540269 FAM221BA6H8Z2 402 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 IMPA2O14732 288 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 CASKO14936 926 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 MAGEB4O15481 346 aaPredicted RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 HPGDSO60760 199 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 MAOAP21397 527 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 NR4A2P43354 598 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 DEFA1P59665 94 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 DEFA3P59666 94 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 ARPC4P59998 168 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 CLPPQ16740 277 aaPredicted RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 PRTGQ2VWP7 1150 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 AKAP14Q86UN6 197 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 ZNF655Q8N720 491 aaPredicted RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 RCBTB1Q8NDN9 531 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 OR52N1Q8NH53 320 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 VSTM2LQ96N03 204 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 ATF6BQ99941 703 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 ALG8Q9BVK2 526 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 TTTY10Q9BZA0 68 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 WSB2Q9NYS7 404 aaPredicted RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 ZMIZ1Q9ULJ6 1067 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 RBMX2Q9Y388 322 aaKnown RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 FABP12A6NFH5 140 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 POLR1CO15160 346 aaPredicted RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 HCCSP53701 268 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 E2F1Q01094 437 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 GPR50Q13585 617 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 GAS6Q14393 721 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 GXYLT1Q4G148 440 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 ZCCHC12Q6PEW1 402 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 SSX6Q7RTT6 188 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 GATAD2AQ86YP4 633 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 RNF113BQ8IZP6 322 aaKnown RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 ARL14Q8N4G2 192 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 DNAJA4Q8WW22 397 aaPredicted RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 C11orf54Q9H0W9 315 aaPredicted RBP11.42□□□□□ -0.58
USP10-202ENST00000540269 MCCC2Q9HCC0 563 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 LRIT1Q9P2V4 623 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 MED31Q9Y3C7 131 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 CLCA3PQ9Y6N3 262 aa11.42□□□□□ -0.58
USP10-202ENST00000540269 PLA2G10O15496 165 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 TMED10P49755 219 aaKnown RBP11.41□□□□□ -0.58
USP10-202ENST00000540269 ACSM1Q08AH1 577 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.41□□□□□ -0.589e-10■□□□□ 9.6
USP10-202ENST00000540269 MANEAQ5SRI9 462 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 KIRREL2Q6UWL6 708 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 RPTNQ6XPR3 784 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 ACBD7Q8N6N7 88 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 LRRC17Q8N6Y2 441 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 OR10H4Q8NGA5 316 aa11.41□□□□□ -0.58
USP10-202ENST00000540269 OR52L1Q8NGH7 329 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms