RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 URADA6NGE7 173 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 TTC36A6NLP5 189 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 PPP1R3DO95685 299 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 GPR75O95800 540 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 AGR2O95994 175 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 HMGN1P05114 100 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 DBIP07108 87 aaKnown RBP10.65□□□□□ -0.7
C11orf54-214ENST00000540113 CHRNB1P11230 501 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 IL9P15248 144 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 BMP7P18075 431 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 E2F1Q01094 437 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 FOXK2Q01167 660 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 FAM53BQ14153 422 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 TBRG1Q3YBR2 411 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 EIPR1Q53HC9 387 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 MEPCEQ7L2J0 689 aaKnown RBP10.65□□□□□ -0.7
C11orf54-214ENST00000540113 ARL14Q8N4G2 192 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 RFLNBQ8N5W9 214 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 SCAIQ8N9R8 606 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 SLC37A3Q8NCC5 494 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 C7orf57Q8NEG2 295 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 OR52L1Q8NGH7 329 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 OR51L1Q8NGJ5 315 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 SETD6Q8TBK2 473 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 UBASH3BQ8TF42 649 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 SLC35B4Q969S0 331 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 ANKRD9Q96BM1 317 aaPredicted RBP10.65□□□□□ -0.7
C11orf54-214ENST00000540113 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 CTRCQ99895 268 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 ISYNA1Q9NPH2 558 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 POT1Q9NUX5 634 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 FLRT3Q9NZU0 649 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 HCN3Q9P1Z3 774 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 CYP8B1Q9UNU6 501 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 DTX4Q9Y2E6 619 aa10.65□□□□□ -0.7
C11orf54-214ENST00000540113 A0A0J9YY10 115 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 DAPL1A0PJW8 107 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 C2orf74A8MZ97 194 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 LRRN3E7EW58 273 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 J3QRE1 110 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 RNF13O43567 381 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 GALR3O60755 368 aaPredicted RBP10.65□□□□□ -0.71
C11orf54-214ENST00000540113 TNFP01375 233 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 IGKV1D-16P01601 117 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 HLA-DPB1P04440 258 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 ATP1B1P05026 303 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 THBS1P07996 1170 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 NGFRP08138 427 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 ST6GAL1P15907 406 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 RPS4Y1P22090 263 aaKnown RBP10.65□□□□□ -0.71
C11orf54-214ENST00000540113 SHC1P29353 583 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 RABIFP47224 123 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 POU6F2P78424 691 aaPredicted RBP10.65□□□□□ -0.71
C11orf54-214ENST00000540113 SLC3A1Q07837 685 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 FZD2Q14332 565 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 IDNKQ5T6J7 187 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 ARL9Q6T311 187 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 Q8N402 240 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 METTL27Q8N6F8 245 aaPredicted RBP10.65□□□□□ -0.71
C11orf54-214ENST00000540113 CDRT4Q8N9R6 151 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 CHAC2Q8WUX2 184 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 KISS1RQ969F8 398 aaPredicted RBP10.65□□□□□ -0.71
C11orf54-214ENST00000540113 TNFRSF13CQ96RJ3 184 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 TTYH2Q9BSA4 534 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 SLC22A4Q9H015 551 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 LRRN3Q9H3W5 708 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 LYRM4Q9HD34 91 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 C2orf42Q9NWW7 574 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 GRIP1Q9Y3R0 1128 aa10.65□□□□□ -0.71
C11orf54-214ENST00000540113 A0A1W2PPK0 400 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 CCDC182A6NF36 153 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 FAM25AB3EWG3 89 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 FAM25CB3EWG5 89 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 FAM25GB3EWG6 89 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 B4DXG7 233 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 PRAMEF26H0Y7S4 382 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 TGFBR3LH3BV60 316 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 GTPBP1O00178 669 aaKnown RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 CBX7O95931 251 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 SLC2A2P11168 524 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 ACVR1BP36896 505 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 OR10A3P58181 314 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 MAT1AQ00266 395 aaKnown RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 ASAH1Q13510 395 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 CRMP1Q14194 572 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 GXYLT1Q4G148 440 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 PRPF38BQ5VTL8 546 aaKnown RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 PAMR1Q6UXH9 720 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 TAF8Q7Z7C8 310 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 SAMD14Q8IZD0 417 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 ACBD7Q8N6N7 88 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 OR13C5Q8NGS8 318 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 BRIX1Q8TDN6 353 aaKnown RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 DNAJA4Q8WW22 397 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 TOE1Q96GM8 510 aaKnown RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 FYTTD1Q96QD9 318 aaKnown RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 CCDC3Q9BQI4 270 aa10.64□□□□□ -0.71
C11orf54-214ENST00000540113 TTYH1Q9H313 450 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-214ENST00000540113 MED17Q9NVC6 651 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms