RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CLOCKO15516 846 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 LY6G6DO95868 133 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 MATN1P21941 496 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 ENPP1P22413 925 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 CLDN8P56748 225 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 CSNK2A1P68400 391 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-211ENST00000539843 EMX2Q04743 252 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 SMU1Q2TAY7 513 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 SFRP5Q5T4F7 317 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 TFAP2EQ6VUC0 442 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 EIF3MQ7L2H7 374 aaKnown RBP13.63□□□□□ -0.23
UBE3B-211ENST00000539843 KRTCAP2Q8N6L1 136 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 GPR119Q8TDV5 335 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 OIT3Q8WWZ8 545 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 ST8SIA1Q92185 356 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBE3B-211ENST00000539843 FBXW5Q969U6 566 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 GTPBP3Q969Y2 492 aaKnown RBP13.63□□□□□ -0.23
UBE3B-211ENST00000539843 ZHX1-C8orf76Q96EF9 292 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 ARSGQ96EG1 525 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 NPAS1Q99742 590 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 SRXN1Q9BYN0 137 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 EMC3Q9P0I2 261 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 ZDHHC2Q9UIJ5 367 aa13.63□□□□□ -0.23
UBE3B-211ENST00000539843 SERINC4A6NH21 518 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 CNOT4O95628 575 aaKnown RBP13.62□□□□□ -0.23
UBE3B-211ENST00000539843 CSTAP01040 98 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 BPGMP07738 259 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 G6PDP11413 515 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 PAX1P15863 534 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 PGCP20142 388 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 LOXP28300 417 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-211ENST00000539843 C21orf58P58505 322 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 HBA1P69905 142 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 ITGADQ13349 1161 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 QPRTQ15274 297 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 GPR68Q15743 365 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 ETFDHQ16134 617 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 PDZK1Q5T2W1 519 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 ANXA8L1Q5VT79 327 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 OR5D16Q8NGK9 328 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 OR4A15Q8NGL6 344 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF563Q8TA94 476 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 SLC25A43Q8WUT9 341 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-211ENST00000539843 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 OR5B2Q96R09 309 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 SDF2Q99470 211 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 DPY30Q9C005 99 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 LAT2Q9GZY6 243 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 ALG2Q9H553 416 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 FAIMQ9NVQ4 179 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 ASIC5Q9NY37 505 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 LAMP3Q9UQV4 416 aa13.62□□□□□ -0.23
UBE3B-211ENST00000539843 MAP1AP78559 2803 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-211ENST00000539843 TRIM64A6NGJ6 449 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 TRIM64BA6NI03 449 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 RNASET2O00584 256 aaKnown RBP13.61□□□□□ -0.23
UBE3B-211ENST00000539843 ANKRD28O15084 1053 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 ADAP00813 363 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 SHC1P29353 583 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 RNF144AP50876 292 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-211ENST00000539843 ANXA11P50995 505 aaKnown RBP13.61□□□□□ -0.23
UBE3B-211ENST00000539843 RASGEF1BQ0VAM2 473 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 PDCD2Q16342 344 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-211ENST00000539843 DPY19L1Q2PZI1 675 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 TIGD2Q4W5G0 525 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 SLC25A53Q5H9E4 307 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
UBE3B-211ENST00000539843 C22orf34Q6ZV56 151 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-211ENST00000539843 C6orf120Q7Z4R8 191 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF100Q8IYN0 542 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 GABRG1Q8N1C3 465 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 C3orf30Q96M34 536 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 TMEM204Q9BSN7 226 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 BCO1Q9HAY6 547 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 POLE3Q9NRF9 147 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF701Q9NV72 531 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-211ENST00000539843 SLC35A3Q9Y2D2 325 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 ARID1AO14497 2285 aa13.61□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF469Q96JG9 3925 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 A0A1W2PP18 115 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 NPIPB9F8W1W9 429 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 GCM2O75603 506 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 SERPINE1P05121 402 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 UBTFL6P0CB48 400 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 TFPIP10646 304 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 FKBP2P26885 142 aaKnown RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 PCSK6P29122 969 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 CLNS1AP54105 237 aaKnown RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 RPS26P62854 115 aaKnown RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 MERTKQ12866 999 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 TOMM34Q15785 309 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 STK11Q15831 433 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF141Q15928 474 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 NDUFAF6Q330K2 333 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 ARHGAP11BQ3KRB8 267 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 ADAM5Q6NVV9 412 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms