RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 OMA1Q96E52 524 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 LRR1Q96L50 414 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 RXFP3Q9NSD7 469 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 CARD8Q9Y2G2 431 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 GTPBP1O00178 669 aaKnown RBP20.6■□□□□ 0.89
HOMER3-204ENST00000539827 TO15178 435 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 TSPAN2O60636 221 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 CPNE3O75131 537 aaKnown RBP20.6■□□□□ 0.89
HOMER3-204ENST00000539827 NGFRP08138 427 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 UBL4AP11441 157 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 TBXA2RP21731 343 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 ACP1P24666 158 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 ACVR2AP27037 513 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 UBE2UQ5VVX9 321 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 ULK3Q6PHR2 472 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 HSDL2Q6YN16 418 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 SLC34A3Q8N130 599 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF441Q8N8Z8 693 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 NFAM1Q8NET5 270 aaPredicted RBP20.6■□□□□ 0.89
HOMER3-204ENST00000539827 TMEM163Q8TC26 289 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 FGF11Q92914 225 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 PMEPA1Q969W9 287 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF582Q96NG8 517 aaPredicted RBP20.6■□□□□ 0.89
HOMER3-204ENST00000539827 SLC38A2Q96QD8 506 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 SPSB2Q99619 263 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 DCUN1D5Q9BTE7 237 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 OR52D1Q9H346 318 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 PCDHGA5Q9Y5G8 931 aa20.6■□□□□ 0.89
HOMER3-204ENST00000539827 SAGE2PA6NJ88 616 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 ADH7P40394 386 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 CCR4P51679 360 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF91Q05481 1191 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 PGGHGQ32M88 737 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 SYT14P1Q58G82 188 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 FAM199XQ6PEV8 388 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-204ENST00000539827 BMP8AQ7Z5Y6 402 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF440Q8IYI8 595 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 TMCO5AQ8N6Q1 288 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 FAM71CQ8NEG0 241 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 OR13C2Q8NGS9 318 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 WDR36Q8NI36 951 aaKnown RBP20.59■□□□□ 0.89
HOMER3-204ENST00000539827 FANK1Q8TC84 345 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.59■□□□□ 0.89
HOMER3-204ENST00000539827 TMEM5Q9Y2B1 443 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 PCDHGB2Q9Y5G2 931 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 HEATR5AQ86XA9 2040 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 CTBP2P56545 445 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 FXYD6P3P58550 94 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 COPZ1P61923 177 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 RNF4P78317 190 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 IRF3Q14653 427 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 TBCEQ15813 527 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-204ENST00000539827 CCDC157Q569K6 752 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 PLA2G2CQ5R387 149 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 PAPD4Q6PIY7 484 aaKnown RBP20.59■□□□□ 0.89
HOMER3-204ENST00000539827 CBLN3Q6UW01 205 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 C16orf47Q6ZP98 133 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-204ENST00000539827 TMPRSS11FQ6ZWK6 438 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 CLDN22Q8N7P3 220 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 YIPF6Q96EC8 236 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 CRB3Q9BUF7 120 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 RTN4RQ9BZR6 473 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 ENKD1Q9H0I2 346 aa20.59■□□□□ 0.89
HOMER3-204ENST00000539827 RPL36Q9Y3U8 105 aaKnown RBP20.59■□□□□ 0.89
HOMER3-204ENST00000539827 A0A1W2PPW3 197 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 EFCAB9A8MZ26 197 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 SAGP10523 405 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-204ENST00000539827 DBTP11182 482 aaKnown RBP20.58■□□□□ 0.89
HOMER3-204ENST00000539827 ABCD3P28288 659 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 RBM34P42696 430 aaKnown RBP20.58■□□□□ 0.89
HOMER3-204ENST00000539827 ST13P50502 369 aaKnown RBP20.58■□□□□ 0.89
HOMER3-204ENST00000539827 MC2RQ01718 297 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 SKP2Q13309 424 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 FAM69BQ5VUD6 431 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 PLAG1Q6DJT9 500 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 LINC00114Q6XXX2 140 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 SLC16A12Q6ZSM3 486 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 SLCO6A1Q86UG4 719 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 C8orf44Q96CB5 159 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 HSPBAP1Q96EW2 488 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF426Q9BUY5 554 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 HHATLQ9HCP6 504 aa20.58■□□□□ 0.89
HOMER3-204ENST00000539827 FLRT2O43155 660 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 ZNF264O43296 627 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 PTHP01270 115 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 GP1BAP07359 652 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 PIPP12273 146 aaPredicted RBP20.57■□□□□ 0.88
HOMER3-204ENST00000539827 CRYZQ08257 329 aaKnown RBP20.57■□□□□ 0.88
HOMER3-204ENST00000539827 SLC25A30Q5SVS4 291 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 MEDAGQ5VYS4 303 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 MARCH3Q86UD3 253 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 ANKRD13BQ86YJ7 626 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 APCDD1LQ8NCL9 501 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 BRIX1Q8TDN6 353 aaKnown RBP20.57■□□□□ 0.88
HOMER3-204ENST00000539827 RAB2BQ8WUD1 216 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 SH3YL1Q96HL8 342 aaPredicted RBP20.57■□□□□ 0.88
HOMER3-204ENST00000539827 KLHDC3Q9BQ90 382 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 WDR77Q9BQA1 342 aaPredicted RBP20.57■□□□□ 0.88
HOMER3-204ENST00000539827 UBQLN3Q9H347 655 aa20.57■□□□□ 0.88
HOMER3-204ENST00000539827 ENPP5Q9UJA9 477 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms