RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CCDC74BQ96LY2 380 aa13.62□□□□□ -0.23
ATL3-203ENST00000538786 FGF20Q9NP95 211 aaPredicted RBP13.62□□□□□ -0.23
ATL3-203ENST00000538786 COPS7AQ9UBW8 275 aa13.62□□□□□ -0.23
ATL3-203ENST00000538786 CACNA1EQ15878 2313 aa13.62□□□□□ -0.23
ATL3-203ENST00000538786 ADAMTS20P59510 1910 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 CCRL2O00421 344 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 BHLHE40O14503 412 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 HCN1O60741 890 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 CSO75390 466 aaKnown RBP13.61□□□□□ -0.23
ATL3-203ENST00000538786 CER1O95813 267 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 SCG5P05408 212 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 INHBBP09529 407 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 CKMT1AP12532 417 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 GPR143P51810 404 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 CDH11P55287 796 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 COPZ1P61923 177 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 TSTQ16762 297 aaKnown RBP13.61□□□□□ -0.23
ATL3-203ENST00000538786 DGUOKQ16854 277 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 HLA-DQA1Q5Y7H0 255 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 SMARCD3Q6STE5 483 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 SLCO6A1Q86UG4 719 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 C9orf40Q8IXQ3 194 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 LNX2Q8N448 690 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 OR1N1Q8NGS0 311 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 OR13C2Q8NGS9 318 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 DNAJA4Q8WW22 397 aaPredicted RBP13.61□□□□□ -0.23
ATL3-203ENST00000538786 ZHX1-C8orf76Q96EF9 292 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 OPALINQ96PE5 141 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 GAL3ST4Q96RP7 486 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 PLGRKTQ9HBL7 147 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 RARRES3Q9UL19 164 aa13.61□□□□□ -0.23
ATL3-203ENST00000538786 OR6C76A6NM76 312 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 PATE3B3GLJ2 98 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SCDO00767 359 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 MYL12BO14950 172 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 PTP4A3O75365 173 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 UTS2O95399 124 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 NGFRP08138 427 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 UGT2B10P36537 528 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 C1DQ13901 141 aaKnown RBP13.6□□□□□ -0.23
ATL3-203ENST00000538786 NXNL2Q5VZ03 156 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 LINC00299Q6ZSB3 139 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SLC38A9Q8NBW4 561 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 OR2I1PQ8NGU4 316 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 STT3BQ8TCJ2 826 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 PHOX2BQ99453 314 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 TAPBPLQ9BX59 468 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 FN3KQ9H479 309 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SYNDIG1Q9H7V2 258 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 EXOSC3Q9NQT5 275 aaKnown RBP13.6□□□□□ -0.23
ATL3-203ENST00000538786 FBXO4Q9UKT5 387 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 PCDHGA3Q9Y5H0 932 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SDK1Q7Z5N4 2213 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 ARID1BQ8NFD5 2236 aaPredicted RBP13.6□□□□□ -0.23
ATL3-203ENST00000538786 A0A087WUJ7 227 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 ARHGAP33O14559 1287 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 TO15178 435 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SCRG1O75711 98 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SLC2A10O95528 541 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 UBL4AP11441 157 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 MYL12AP19105 171 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SERPINB10P48595 397 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 LIMK1P53667 647 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 TUBA1BP68363 451 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SKP2Q13309 424 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 DOC2BQ14184 412 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 CD226Q15762 336 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 CLPPQ16740 277 aaPredicted RBP13.6□□□□□ -0.23
ATL3-203ENST00000538786 TIMM50Q3ZCQ8 353 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 NKAIN1Q4KMZ8 207 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 PWWP2BQ6NUJ5 590 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 TUBA1AQ71U36 451 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 SLC29A4Q7RTT9 530 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 OAFQ86UD1 273 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 ATCAYQ86WG3 371 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 LSRQ86X29 649 aaPredicted RBP13.6□□□□□ -0.23
ATL3-203ENST00000538786 SLC43A2Q8N370 569 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 IFI44Q8TCB0 444 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 CCNL2Q96S94 520 aaPredicted RBP13.6□□□□□ -0.23
ATL3-203ENST00000538786 WWTR1Q9GZV5 400 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 ENKD1Q9H0I2 346 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 CHCHD3Q9NX63 227 aaKnown RBP13.6□□□□□ -0.23
ATL3-203ENST00000538786 NUP210LQ5VU65 1888 aa13.6□□□□□ -0.23
ATL3-203ENST00000538786 ASXL3Q9C0F0 2248 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 TIAF1O95411 115 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 NADKO95544 446 aaPredicted RBP13.59□□□□□ -0.23
ATL3-203ENST00000538786 HBQ1P09105 142 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 HTR1FP30939 366 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 ETV5P41161 510 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 ETV1P50549 477 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 SSX1Q16384 188 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 ZNF829Q3KNS6 432 aaPredicted RBP13.59□□□□□ -0.23
ATL3-203ENST00000538786 TRIM61Q5EBN2 209 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 SLC23A3Q6PIS1 610 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 THSD4Q6ZMP0 1018 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 LANCL3Q6ZV70 420 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 USP43Q70EL4 1123 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 ZBTB46Q86UZ6 589 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 CROCCP3Q8IVE0 287 aa13.59□□□□□ -0.23
ATL3-203ENST00000538786 OR51A7Q8NH64 312 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms