RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 DCTN4Q9UJW0 460 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 ING1Q9UK53 422 aaPredicted RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 WDR45Q9Y484 360 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 DSPPQ9NZW4 1301 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 A0A096LPI6 279 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 FAM221AA4D161 298 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 AGAP5A6NIR3 686 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 SLC22A20A6NK97 555 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 A8MXE2 369 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 LINC01387J3KSC0 135 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 AP3D1O14617 1153 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 TNFSF11O14788 317 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 ZNF264O43296 627 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 EIF4E2O60573 245 aaKnown RBP7.53□□□□□ -1.2
SPARC-208ENST00000538026 AK1P00568 194 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 IL2RAP01589 272 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 UBL4AP11441 157 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 COX6B1P14854 86 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 HPGDP15428 266 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 OPRM1P35372 400 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 KHKP50053 298 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 ATP4BP51164 291 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 SESN3P58005 492 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 KCNJ10P78508 379 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 GUCY1A3Q02108 690 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 QPRTQ15274 297 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 ADRM1Q16186 407 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 AGKQ53H12 422 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
SPARC-208ENST00000538026 ZNF474Q6S9Z5 364 aaPredicted RBP7.53□□□□□ -1.2
SPARC-208ENST00000538026 LRRC74BQ6ZQY2 392 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 C16orf62Q7Z3J2 963 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 CLIP4Q8N3C7 705 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 ZNF614Q8N883 585 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 OR10D3Q8NH80 312 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 RNASE6Q93091 150 aaKnown RBP7.53□□□□□ -1.2
SPARC-208ENST00000538026 MAL2Q969L2 176 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 SPDL1Q96EA4 605 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 ITCHQ96J02 903 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 PINK1Q9BXM7 581 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 POLE3Q9NRF9 147 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 EXD2Q9NVH0 621 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 DNAJB12Q9NXW2 375 aaKnown RBP7.53□□□□□ -1.2
SPARC-208ENST00000538026 GMEB1Q9Y692 573 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 PLCE1Q9P212 2302 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 ARID1AO14497 2285 aa7.53□□□□□ -1.2
SPARC-208ENST00000538026 SETD2Q9BYW2 2564 aaPredicted RBP7.53□□□□□ -1.2
SPARC-208ENST00000538026 UQCRHLA0A096LP55 91 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 A0A1W2PNR3 127 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 A0A1W2PP18 115 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 FAM47E-STBD1D6RA91 191 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 GTPBP1O00178 669 aaKnown RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 CLIC1O00299 241 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 NR5A2O00482 541 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 EIF1AYO14602 144 aaKnown RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 CXCL13O43927 109 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 GCM2O75603 506 aaPredicted RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 KRT75O95678 551 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 AGR2O95994 175 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 CSTAP01040 98 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 UBTFL6P0CB48 400 aaPredicted RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 PRG2P13727 222 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 EDNRAP25101 427 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 ADH6P28332 368 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 SFTPDP35247 375 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 ACAA2P42765 397 aaKnown RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 EIF1AXP47813 144 aaKnown RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 ASCL1P50553 236 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 SUMO3P55854 103 aaPredicted RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 EEF1A1P68104 462 aaKnown RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 LRRC74AQ0VAA2 488 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 SELPLGQ14242 412 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 SQLEQ14534 574 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 PON3Q15166 354 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 RGNQ15493 299 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 GPAT3Q53EU6 434 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 C6orf10Q5SRN2 563 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 EIF3MQ7L2H7 374 aaKnown RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 VRK2Q86Y07 508 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 ADGRG3Q86Y34 549 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 GRAMD2AQ8IUY3 354 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 LILRA2Q8N149 483 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 MEIOBQ8N635 442 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 ZNF527Q8NB42 609 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 OR2V1Q8NHB1 315 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 LINC01560Q8TB33 94 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 ROBO4Q8WZ75 1007 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 OSTF1Q92882 214 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 C14orf79Q96F83 325 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 TMEM19Q96HH6 336 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 ZNF317Q96PQ6 595 aaPredicted RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 TM9SF2Q99805 663 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 WFDC6Q9BQY6 131 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 CCDC106Q9BWC9 280 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 CCDC134Q9H6E4 229 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 MTHFD2LQ9H903 347 aaPredicted RBP7.52□□□□□ -1.21
SPARC-208ENST00000538026 ACER3Q9NUN7 267 aa7.52□□□□□ -1.21
SPARC-208ENST00000538026 FGFR1OP2Q9NVK5 253 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms