RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 C14orf28Q4W4Y0 310 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 FNDC7Q5VTL7 733 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF550Q7Z398 422 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 C11orf74Q86VG3 221 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 CADM3Q8N126 398 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 OR7G1Q8NGA0 311 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 C16orf52Q8NHV5 167 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 RBM18Q96H35 190 aaKnown RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SPACA7Q96KW9 195 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SLC38A3Q99624 504 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 HCAR1Q9BXC0 346 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 HAO2Q9NYQ3 351 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SEMA5BQ9P283 1151 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 CA14Q9ULX7 337 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 IL9P15248 144 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 PTNP21246 168 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SLC9A3P48764 834 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 C22orf42Q6IC83 251 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 PLBD1Q6P4A8 553 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 ZC3H14Q6PJT7 736 aaKnown RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 CDK20Q8IZL9 346 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 BCORP1Q8N888 145 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 DNAJA4Q8WW22 397 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 KATNB1Q9BVA0 655 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 OR10A5Q9H207 317 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 Q9N2J8 555 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 POLE4Q9NR33 117 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SNTG1Q9NSN8 517 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 TNFRSF10DQ9UBN6 386 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SERTAD3Q9UJW9 196 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 ICAM5Q9UMF0 924 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SLC35A3Q9Y2D2 325 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 PCDH15Q96QU1 1955 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 IGKV3D-11A0A0A0MRZ8 115 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 CDRT1O95170 752 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 IGF2P01344 180 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 MAOAP21397 527 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 ADH7P40394 386 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 SERTAD2Q14140 314 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF79Q15937 498 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 GLYR1Q49A26 553 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 ULK3Q6PHR2 472 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 LHFPL3Q86UP9 236 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 OR51Q1Q8NH59 317 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 SLC2A12Q8TD20 617 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 CHAC2Q8WUX2 184 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 PTP4A1Q93096 173 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 PTCHD1Q96NR3 888 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 SECISBP2Q96T21 854 aaKnown RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 MIXL1Q9H2W2 232 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 POLHQ9Y253 713 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 MRPS17Q9Y2R5 130 aaKnown RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 CMAHPQ9Y471 501 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 SLC22A31A6NKX4 558 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 BMP7P18075 431 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 GTF2E2P29084 291 aaKnown RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 HNRNPKP61978 463 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF267Q14586 743 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 KLHL26Q53HC5 615 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 KIRREL2Q6UWL6 708 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 LSRQ86X29 649 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 LAX1Q8IWV1 398 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 SLC37A3Q8NCC5 494 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 GRHL3Q8TE85 626 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 SPRYD4Q8WW59 207 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 CCNL2Q96S94 520 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-207ENST00000537063 PDE7BQ9NP56 450 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 ERVK-19Q9WJR5 959 aa8.57□□□□□ -1.04
UBE3B-207ENST00000537063 FAM86C2PA6NEL3 165 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 FAM183AA6NL82 134 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 CD1CP29017 333 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 KRR1Q13601 381 aaKnown RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 GRM7Q14831 915 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SETD6Q8TBK2 473 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 MMABQ96EY8 250 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 TGM7Q96PF1 710 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 DCLRE1CQ96SD1 692 aaKnown RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 TM9SF2Q99805 663 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SRRQ9GZT4 340 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SPRTNQ9H040 489 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 H2AFY2Q9P0M6 372 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 MMACHCQ9Y4U1 282 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 TRAV27A0A087WT01 109 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SERINC4A6NH21 518 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 LRRTM2O43300 516 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SEC14L5O43304 696 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 CDC123O75794 336 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 CLEC2LP0C7M8 214 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 CD53P19397 219 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SDC2P34741 201 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ERV3-1Q14264 604 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 GALEQ14376 348 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF791Q3KP31 576 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 CRTC2Q53ET0 693 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ALG10BQ5I7T1 473 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 DEFB119Q8N690 84 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ACBD7Q8N6N7 88 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 TMEM99Q8N816 258 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 TMEM203Q969S6 136 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 MVB12AQ96EY5 273 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms