RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TADA1Q96BN2 335 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 MTERF3Q96E29 417 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 RBM41Q96IZ5 413 aaKnown RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 TTC25Q96NG3 672 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 TSGA13Q96PP4 275 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 SIGLEC12Q96PQ1 595 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 GPATCH1Q9BRR8 931 aaKnown RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 SYT11Q9BT88 431 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 CHRNA10Q9GZZ6 450 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 OR52A5Q9H2C5 316 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 KCNK15Q9H427 330 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 PARVAQ9NVD7 372 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 HAUS2Q9NVX0 235 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 TAB2Q9NYJ8 693 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 EURLQ9NYK6 297 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 C3orf18Q9UK00 162 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF148Q9UQR1 794 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 RNF6Q9Y252 685 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 PYGO1Q9Y3Y4 419 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 L3MBTL1Q9Y468 752 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 PKD1L1Q8TDX9 2849 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 IGHV1-45A0A0A0MS14 117 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 IGLV9-49A0A0B4J1Y8 123 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 GLYATL1P3A0A0U1RQE8 302 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 A0A1W2PQ72 361 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 A0A1W2PRB8 838 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 TSPAN12O95859 305 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 UQCRHP07919 91 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 TPM2P07951 284 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 MAGP20916 626 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 DNASE1P24855 282 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 CCNCP24863 283 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PDHA2P29803 388 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PCK1P35558 622 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 HMGCLP35914 325 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 SPAM1P38567 509 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF33BQ06732 778 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 LGALS3BPQ08380 585 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 DPYSL3Q14195 570 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 TMEM187Q14656 261 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 P2RY6Q15077 328 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PAFAH1B3Q15102 231 aaKnown RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 SYCP1Q15431 976 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 TPD52L1Q16890 204 aaPredicted RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 GTDC1Q4AE62 458 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 BCL7AQ4VC05 210 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 CNSTQ6PJW8 725 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PAMR1Q6UXH9 720 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 HOOK3Q86VS8 718 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 LRRC49Q8IUZ0 686 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 CCDC71Q8IV32 467 aaPredicted RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PHC2Q8IXK0 858 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 MDS2Q8NDY4 140 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 OR5AR1Q8NGP9 310 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 LILRB4Q8NHJ6 448 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 HSD17B8Q92506 261 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 IMP4Q96G21 291 aaKnown RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 RMND5BQ96G75 393 aaPredicted RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 LINC00615Q96LM1 132 aaPredicted RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 SGK494Q96LW2 274 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 NPAS2Q99743 824 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 ASCL2Q99929 193 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 VN1R1Q9GZP7 353 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 COG4Q9H9E3 785 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 A4GALTQ9NPC4 353 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 CUTCQ9NTM9 273 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 SMOXQ9NWM0 555 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 IL17CQ9P0M4 197 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 STOX2Q9P2F5 926 aaPredicted RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 NXT1Q9UKK6 140 aaKnown RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PLCL2Q9UPR0 1127 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 MRPS28Q9Y2Q9 187 aaKnown RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 ATP6V1DQ9Y5K8 247 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 HEBP2Q9Y5Z4 205 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 TRRAPQ9Y4A5 3859 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PRKDCP78527 4128 aaKnown RBP4.65□□□□□ -1.67
CLIP1-207ENST00000536634 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.67
CLIP1-207ENST00000536634 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.64□□□□□ -1.671e-9■■■■■ 46
CLIP1-207ENST00000536634 CHD3Q12873 2000 aaKnown RBP4.64□□□□□ -1.67
CLIP1-207ENST00000536634 A0A1B0GU03 582 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 IDSB3KWA1 339 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 E9PI62 339 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 ADAMDEC1O15204 470 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 TRMUO75648 421 aaKnown RBP4.64□□□□□ -1.67
CLIP1-207ENST00000536634 GABRA5P31644 462 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 ANP32AP39687 249 aaKnown RBP4.64□□□□□ -1.67
CLIP1-207ENST00000536634 WNT5AP41221 380 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 PRLHRP49683 370 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 RAB28P51157 221 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 SIRPAP78324 504 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 IFI35P80217 286 aaPredicted RBP4.64□□□□□ -1.67
CLIP1-207ENST00000536634 DEFB113Q30KQ7 82 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 ZFP69Q49AA0 526 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 BOLA3Q53S33 107 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 TCP11X2Q5H9J9 407 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 CCDC122Q5T0U0 273 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 CCDC183Q5T5S1 534 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms