RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PEBP1P30086 187 aaKnown RBP16.69■□□□□ 0.26
RAB40C-203ENST00000535977 NHLRC3Q5JS37 347 aa16.69■□□□□ 0.26
RAB40C-203ENST00000535977 BCDIN3DQ7Z5W3 292 aaKnown RBP16.69■□□□□ 0.26
RAB40C-203ENST00000535977 OR4N4Q8N0Y3 316 aa16.69■□□□□ 0.26
RAB40C-203ENST00000535977 OR2M4Q96R27 311 aa16.69■□□□□ 0.26
RAB40C-203ENST00000535977 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
RAB40C-203ENST00000535977 EXOSC1Q9Y3B2 195 aaKnown RBP16.69■□□□□ 0.26
RAB40C-203ENST00000535977 A0A087WUU8 490 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 TMEM129A0AVI4 362 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 NCR1O76036 304 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 FAM209BQ5JX69 171 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 IQCF1Q8N6M8 205 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 PIGXQ8TBF5 258 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 NT5CQ8TCD5 201 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 OTUB1Q96FW1 271 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 C16orf58Q96GQ5 468 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 AHCYL2Q96HN2 611 aaKnown RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 ATF6BQ99941 703 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 DPYSL5Q9BPU6 564 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 SPHK1Q9NYA1 384 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 SPIN1Q9Y657 262 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 RNF215Q9Y6U7 377 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 A8MXK9 166 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 FAM25EA8MYX2 175 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 TOXO94900 526 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 LALBAP00709 142 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 GDI1P31150 447 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 STAT5AP42229 794 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 KIR2DL1P43626 348 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 CSTF1Q05048 431 aaKnown RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 CRTC2Q53ET0 693 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 RGS7BPQ6MZT1 257 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 TMEM91Q6ZNR0 172 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 WDR53Q7Z5U6 358 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-203ENST00000535977 PAQR7Q86WK9 346 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 BMPERQ8N8U9 685 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 KCT2Q8NC54 265 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 LCN9Q8WX39 176 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 OSTF1Q92882 214 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 DLL4Q9NR61 685 aa16.68■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 TCRBV16S1A1N1A0A5B0 115 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-203ENST00000535977 F8W036 122 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 DNASE2O00115 360 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-203ENST00000535977 CASKO14936 926 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 HAAOP46952 286 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 WNT4P56705 351 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 KIAA1024LP59773 190 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 BTN3A2P78410 334 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 DECR1Q16698 335 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 MINDY4Q4G0A6 757 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 LAPTM4BQ86VI4 370 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 ADAMTS15Q8TE58 950 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 MACROD1Q9BQ69 325 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 SAP130Q9H0E3 1048 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 SLC39A1Q9NY26 324 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 PRSS38A1L453 326 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 URADA6NGE7 173 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 FAM170BA6NMN3 283 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 TEX46H3BTG2 121 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 C8orf89P0DMQ9 161 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 PTBP1P26599 531 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAB40C-203ENST00000535977 MC3RP41968 323 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 RAB8AP61006 207 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 DUSP2Q05923 314 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 COL19A1Q14993 1142 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 ZNF750Q32MQ0 723 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 HEPHL1Q6MZM0 1159 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 FTMTQ8N4E7 242 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 DIO2Q92813 273 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 RFKQ969G6 155 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 ABCG5Q9H222 651 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 MTHFD2LQ9H903 347 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-203ENST00000535977 MED17Q9NVC6 651 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 CACNG2Q9Y698 323 aa16.67■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3DA0A087WVF3 549 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3IA0A087WXS9 549 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3EA0A087X179 549 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3LB9A6J9 549 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3HP0C7X1 549 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 NTSR1P30989 418 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 BTCP35070 178 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 ADAM15Q13444 863 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 ATAT1Q5SQI0 421 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3CQ6IPX1 549 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 TBC1D3Q8IZP1 549 aaPredicted RBP16.66■□□□□ 0.26
RAB40C-203ENST00000535977 OR9A2Q8NGT5 310 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 YIPF5Q969M3 257 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 GPA33Q99795 319 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 KRCC1Q9NPI7 259 aaPredicted RBP16.66■□□□□ 0.26
RAB40C-203ENST00000535977 KCNE3Q9Y6H6 103 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 GPR171O14626 319 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 RGS11O94810 467 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 UBXN7O94888 489 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 STATHP02808 62 aa16.66■□□□□ 0.26
RAB40C-203ENST00000535977 ADPRHP54922 357 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms