RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NOVA1P51513 510 aaKnown RBP3.21□□□□□ -1.9
PRKDC-205ENST00000535375 RPL8P62917 257 aaKnown RBP3.21□□□□□ -1.9
PRKDC-205ENST00000535375 EGFEM1PQ0D2K5 195 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 TFDP1Q14186 410 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 TRIP10Q15642 601 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 NCR3LG1Q68D85 454 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 ASPHD2Q6ICH7 369 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 CES3Q6UWW8 571 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 WASH2PQ6VEQ5 465 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 IL34Q6ZMJ4 242 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 FAM133AQ8N9E0 248 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 OR2T33Q8NG76 320 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 POLD4Q9HCU8 107 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 EXTL2Q9UBQ6 330 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 CRLS1Q9UJA2 301 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 RNF6Q9Y252 685 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 CCDC7Q96M83 1385 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 A0A0J9YXY3 114 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 WASHC1A8K0Z3 465 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 TBX19O60806 448 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 ALOX5P09917 674 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 CYLC1P35663 651 aaPredicted RBP3.2□□□□□ -1.9
PRKDC-205ENST00000535375 BTDP43251 543 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 KIR2DS2P43631 304 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 STARP49675 285 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 BDH1Q02338 343 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 NADK2Q4G0N4 442 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 TFDP3Q5H9I0 405 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 LPCAT2Q7L5N7 544 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 HSD11B1LQ7Z5J1 315 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 EFCAB13Q8IY85 973 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 TBC1D21Q8IYX1 336 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 ZNF433Q8N7K0 673 aaPredicted RBP3.2□□□□□ -1.9
PRKDC-205ENST00000535375 SLC5A11Q8WWX8 675 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 SRSF12Q8WXF0 261 aaKnown RBP3.2□□□□□ -1.9
PRKDC-205ENST00000535375 SDSLQ96GA7 329 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 C4orf36Q96KX1 117 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 ERP44Q9BS26 406 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 TBCDQ9BTW9 1192 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 NT5C3AQ9H0P0 336 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 GPN2Q9H9Y4 310 aaPredicted RBP3.2□□□□□ -1.9
PRKDC-205ENST00000535375 CYTL1Q9NRR1 136 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 CHRNA9Q9UGM1 479 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 CHMP2BQ9UQN3 213 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 KDRP35968 1356 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 ATAD2BQ9ULI0 1458 aa3.2□□□□□ -1.9
PRKDC-205ENST00000535375 ESYT2A0FGR8 921 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 CTAGE5O15320 804 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 OPN1LWP04000 364 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 IQCF3P0C7M6 154 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 EPB41P11171 864 aaKnown RBP3.19□□□□□ -1.9
PRKDC-205ENST00000535375 TOP1P11387 765 aaKnown RBP3.19□□□□□ -1.9
PRKDC-205ENST00000535375 HNRNPA2B1P22626 353 aaKnown RBP3.19□□□□□ -1.9
PRKDC-205ENST00000535375 HNMTP50135 292 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 NUP107P57740 925 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 SNTB2Q13425 540 aaKnown RBP3.19□□□□□ -1.9
PRKDC-205ENST00000535375 ZNF630Q2M218 657 aaPredicted RBP3.19□□□□□ -1.9
PRKDC-205ENST00000535375 SLC36A3Q495N2 470 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 FAM120AOSQ5T036 256 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 CYB5R2Q6BCY4 276 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 CENPUQ71F23 418 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 LCA5Q86VQ0 697 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 ZDHHC21Q8IVQ6 265 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 TMEM252Q8N6L7 170 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 FBXO30Q8TB52 745 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 THRSPQ92748 146 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 OSTF1Q92882 214 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 TMEM101Q96IK0 257 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 NRTNQ99748 197 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 POLR1EQ9GZS1 481 aaKnown RBP3.19□□□□□ -1.9
PRKDC-205ENST00000535375 RMND5AQ9H871 391 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.19□□□□□ -1.91e-6■□□□□ 9.5
PRKDC-205ENST00000535375 RDH8Q9NYR8 311 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 MAB21L2Q9Y586 359 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 AP4B1Q9Y6B7 739 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 CARMIL1Q5VZK9 1371 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 PLEKHG1Q9ULL1 1385 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 LRRK1Q38SD2 2015 aa3.19□□□□□ -1.9
PRKDC-205ENST00000535375 IGHV1OR15-1A0A075B7D0 117 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 IGKV6-21A0A0C4DH24 114 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 XPO1O14980 1071 aaKnown RBP3.18□□□□□ -1.9
PRKDC-205ENST00000535375 ZNF264O43296 627 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 UQCRBP14927 111 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 RPS2P15880 293 aaKnown RBP3.18□□□□□ -1.9
PRKDC-205ENST00000535375 ATP5A1P25705 553 aaKnown RBP3.18□□□□□ -1.9
PRKDC-205ENST00000535375 NAPAP54920 295 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 LIM2P55344 173 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 PVRIGQ6DKI7 326 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 SKA3Q8IX90 412 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 OR52M1Q8NGK5 317 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 NANPQ8TBE9 248 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 C7orf33Q8WU49 177 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 ZNF606Q8WXB4 792 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 IL22RA2Q969J5 263 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 UPRTQ96BW1 309 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 HPDLQ96IR7 371 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 FEM1AQ9BSK4 669 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 TMEM121Q9BTD3 319 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 POLR3FQ9H1D9 316 aaPredicted RBP3.18□□□□□ -1.9
PRKDC-205ENST00000535375 FARSBQ9NSD9 589 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms