RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ARPC2O15144 300 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 PFDN6O15212 129 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ACOX3O15254 700 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 MAPK13O15264 365 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CLOCKO15516 846 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ST8SIA3O43173 380 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ENTPD5O75356 428 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ZNF254O75437 659 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 OR6B1O95007 311 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 AK1P00568 194 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 IL1BP01584 269 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SBK2P0C263 348 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 THRBP10828 461 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ODC1P11926 461 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 NCF1P14598 390 aaPredicted RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 UQCRBP14927 111 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ETS2P15036 469 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 HMGA1P17096 107 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 TAC1P20366 129 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 WARSP23381 471 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 IL4RP24394 825 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 MPZP25189 248 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 LMO2P25791 158 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CD27P26842 260 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 PRDX6P30041 224 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SOX6P35712 828 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 NUDT1P36639 197 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 RPL21P46778 160 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 KCNJ1P48048 391 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 LEPRP48357 1165 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 TMED10P49755 219 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 VCPP55072 806 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 PAX9P55771 341 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 MYL6P60660 151 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 TRA2BP62995 288 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 TNNC1P63316 161 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CYCSP99999 105 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 TFAMQ00059 246 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 DR1Q01658 176 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ENPEPQ07075 957 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SIGLEC14Q08ET2 396 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 TWF1Q12792 350 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ASPHQ12797 758 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CHIT1Q13231 466 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CUL2Q13617 745 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 OXA1LQ15070 435 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 KCNJ8Q15842 424 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 IQCCQ4KMZ1 466 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SLC25A53Q5H9E4 307 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 LRRC73Q5JTD7 316 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 TCTE1Q5JU00 501 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ZNF658Q5TYW1 1059 aaPredicted RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 AGAP7PQ5VUJ5 663 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 DUPD1Q68J44 220 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 TXNRD3NBQ6F5E7 133 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 LRRC8BQ6P9F7 803 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ZCCHC12Q6PEW1 402 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ARSKQ6UWY0 536 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ISLR2Q6UXK2 745 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 PAQR9Q6ZVX9 377 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ADAMTSL2Q86TH1 951 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 HOGA1Q86XE5 327 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 TMEM126BQ8IUX1 230 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 MMD2Q8IY49 270 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 THAP8Q8NA92 274 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CCNYQ8ND76 341 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 OR56B2PQ8NGI1 322 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 OR1L3Q8NH93 324 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SUN5Q8TC36 379 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SLC2A14Q8TDB8 520 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 GIPC3Q8TF64 312 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 DDI1Q8WTU0 396 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 C10orf82Q8WW14 230 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CDKL2Q92772 493 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 FGF13Q92913 245 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CAPZA3Q96KX2 299 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CNOT6LQ96LI5 555 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 MAGEB18Q96M61 343 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ZNF560Q96MR9 790 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 RPRD1AQ96P16 312 aaPredicted RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 PSKH2Q96QS6 385 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CIB1Q99828 191 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ACBD6Q9BR61 282 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 MRPL45Q9BRJ2 306 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 PYGO2Q9BRQ0 406 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ERP44Q9BS26 406 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 CABLES2Q9BTV7 478 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 GTPBP2Q9BX10 602 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 MROQ9BYG7 248 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 ACPTQ9BZG2 426 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 THAP2Q9H0W7 228 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 DPEP3Q9H4B8 488 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 COQ10BQ9H8M1 238 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SRD5A3Q9H8P0 318 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 Q9H8V8 135 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 MYNNQ9NPC7 610 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 FARSBQ9NSD9 589 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 MAN2C1Q9NTJ4 1040 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 GID8Q9NWU2 228 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SLCO1C1Q9NYB5 712 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms